Acidipropionibacterium acidipropionici ATCC 4875: PACID_20820
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Entry
PACID_20820 CDS
T02345
Symbol
xerD
Name
(GenBank) Tyrosine recombinase xerC 1
KO
K04763
integrase/recombinase XerD
Organism
pbo
Acidipropionibacterium acidipropionici ATCC 4875
Brite
KEGG Orthology (KO) [BR:
pbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbo03036
]
PACID_20820 (xerD)
Chromosome and associated proteins [BR:
pbo03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
PACID_20820 (xerD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Integrase_1
DUF3435
Motif
Other DBs
NCBI-ProteinID:
AFV89873
UniProt:
K7RY41
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All DBs
Position
complement(2214050..2214976)
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AA seq
308 aa
AA seq
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MGGRGSRVDAVIDGYLDHLVAERGLAANTVAAYRRDLGHYATFLEGRGIDDLAGVTPVDI
SEFSRDLGSRGLASSSVSRAVVAVRNLHRFALAEGVVADDASAGVSPGTRGRRLPKALSI
DAVEALLDSCDTTTVDGLCDRALLELLYGTGARISEVCALDVDDVTPVIADPQLGLRLVG
KGDKERVVPLGSYALDAVQAWLVRGRPARAGRGTPGAALLLNQRGGRLSRQSAWAVLQRA
GRRAGISEHLSPHSLRHSYATHLLDGGADVRVVQELLGHASVTTTQIYTLVTAEHLREVY
RSAHPRAL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgggcggccgcggctcccgggtcgacgccgtgatcgacggatacctcgaccacctggtg
gccgagcggggcctggcggccaacacggtcgcggcctaccggcgcgacctgggccactac
gcgaccttcctggagggccgcgggatcgacgacctggccggcgtcacaccggtcgacatc
tccgagttctcgcgagacctcggctcccgggggctggcctcctccagcgtgagcagggcg
gtcgtcgcggtgcgcaacctgcaccgcttcgcgctcgcggagggcgtggtggccgacgac
gcctcggcgggggtctcgccgggcacccgggggcggcgtcttcccaaggcgctgagcatc
gacgcggtggaggctctgctggactcctgcgacaccacgacggtcgacgggctgtgcgat
cgggccctgctggaacttctctacggcaccggtgccaggatcagcgaggtctgcgcactg
gacgtcgacgacgtcaccccggtcatcgccgacccgcagctgggcctgcggctggtcggc
aagggggacaaggagcgggtggtgccgctgggctcctacgccctggatgcggtgcaggcc
tggctggtgcgcggacgcccggcccgggcggggcgcgggacgccgggtgcggcgctgctg
ctcaaccagcggggaggacggctgtcgcggcagagcgcgtgggccgtgctgcagcgggcg
ggccgtcgggccgggatcagcgagcatctgtccccgcacagcctgcggcactcctacgcc
acccacctgctggacggcggcgcggacgtgagggtcgtccaggagctgctgggccacgcc
tcggtgacaaccacgcagatctacaccctggtcaccgcggagcacctcagagaggtctac
cggtcggcccatccgagggcactgtag
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