Syntrophotalea carbinolica: Pcar_0569
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Entry
Pcar_0569 CDS
T00285
Name
(GenBank) sensor diguanylate cyclase, Cache_1 domain-containing
Organism
pca
Syntrophotalea carbinolica
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Gene cluster
GFIT
Motif
Pfam:
GGDEF
dCache_1
GGDEF_2
CREPT
Motif
Other DBs
NCBI-ProteinID:
ABA87829
UniProt:
Q3A8N2
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Position
complement(691833..693869)
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AA seq
678 aa
AA seq
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MNKRNAFSVRWYHSLLFRTPLLFLLLLAVLVLSLTIIMDTVGRPRLEEQSFRMANQVGNT
MVAQLGERLAVAETLARALATTGATLPLKTEDHLQIIPRLIDELGPSSYIIGGGVWYDPF
AFDPHRERASFFWGRNASGVLEFVADYNDPKGPGYHHEEWYVPGRFLKPGSIFWSKSYVD
PHTFVPMVTCTAPIYRHDRFVGVVTVDLKLAGLEAFFDAQAKKMGGYAFAVDRNGKFLSF
PDVALTRISNQNRFGRKDIEYILARDLADKRPLFAPLADALDSISNDLLQKAKQSARYDR
QVAEVIARDTSEISAAEADLIAAVLQNTTLHSNEGQILLKHFTTPGDLLLQEPCSVAIFH
VPNTYWNIVTVTPVSHAMSAATAIYHAVLAALIVCVSAAVIGAFLTLNNMMMRPLARITH
QLKNAVDINAEEMLCLDDSFRNEFGTFAYWFNVRTRKLADALEQLRIIRGELEQRVAERT
ETLAHTNTKLELEVQQRRRAQQFLRRLAMLDPLTDMANRRSFDASLPSFWQRAKQKKKPL
AMLLVDMDKFKQFNNAYGYQAGDQCLKKIANTMAECTQGDEVRIARFGGEQFAVILPDSD
AEVAQAVAEKIRRQVEALQIPHSGEGISGVVTVSVGVASLLPTKDTHYEHLIAKTNQALY
QAKSNGRNQVAVDSHMPG
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaggaatgccttttccgtgcgttggtatcacagtctgctgtttcgaacgccc
cttctgttccttttgctccttgcggtactggtgctcagccttaccatcatcatggacacc
gttggccgccctcgcctggaagaacaatcctttcgcatggcgaaccaggtgggcaatacc
atggtggcgcaactgggcgagcgactggccgtcgccgaaaccctggcccgcgcgctggca
accaccggtgcaaccctgcccctcaaaacggaagaccacctgcaaatcatccctcgcctg
atcgatgaactcggaccgtcttcctacattatcggcggtggggtatggtacgaccccttt
gctttcgatccccatcgcgagcgggccagttttttctggggtcgcaatgcctcgggagtt
ctcgaattcgtagcggactacaacgatccgaaaggccccggataccaccacgaggaatgg
tatgtacccggacgtttcttgaaacccggatcgatattctggtccaagtcctatgtggac
ccgcacaccttcgtccccatggttacctgcaccgcccccatctacaggcacgaccggttc
gtcggcgtggtcaccgtcgacctcaaactcgccggtctggaagcttttttcgatgctcag
gcaaaaaaaatggggggatacgcctttgctgtggaccgcaacggaaaatttctgtcgttt
ccggatgtcgccctcacccgcatcagcaaccagaacagattcggccgcaaagatatcgag
tatattctggcccgcgacctggccgacaaacggcctctctttgcgcccctggccgacgcc
ctggacagcatcagcaacgatcttctgcaaaaagccaaacagtccgctcgctatgaccgg
caggtcgccgaagtcatcgcccgggacacgtccgagatatctgccgcggaggcggacctc
attgcggcggtactgcagaacacaaccctccatagcaacgaggggcagatactgctcaag
catttcacaacgcccggggacctgctgctccaggaaccctgcagcgttgccattttccat
gtccccaacacctactggaacatcgtcaccgtgacaccggtcagccatgccatgtccgcc
gccacggctatttatcatgccgtgctggcagccctgattgtctgtgtctcggcagcggtt
atcggtgcttttctgacactgaacaacatgatgatgcgccctttggcccgcatcacccat
caattgaaaaatgccgtcgatatcaatgccgaggaaatgctctgcctggatgacagcttt
cgcaacgaattcggcaccttcgcttactggttcaatgttcgaacccgcaaactggccgat
gccctggagcagctgcgcatcattcgtggggaattggaacaacgggtggctgaacgcacg
gaaacattggcgcacaccaacaccaagctggaactggaagtacagcaacgccgacgggcc
cagcaattcctgcgaagactggccatgcttgatcccttgaccgacatggccaatcgccgc
agcttcgatgcctcgctgccgtctttctggcagcgtgccaaacagaaaaaaaagccattg
gcaatgctcctggtcgacatggacaagttcaaacagttcaacaacgcttacggctaccag
gccggcgatcagtgcctcaaaaaaatcgccaatacgatggcggagtgtacccagggcgac
gaggtgcgtatcgcccgtttcggcggcgaacagtttgccgtcatattgcccgacagcgac
gccgaagtggcgcaggccgttgcggaaaagatccgcaggcaggtcgaagcgctgcagatc
cctcacagcggcgaaggtatcagcggtgtcgttaccgtcagtgtcggcgtagccagcttg
cttcccaccaaagacacccactacgagcacctgattgccaaaaccaaccaggctctgtat
caagccaaaagcaatggtcgcaaccaggtagccgtcgacagccacatgcccggttga
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