Syntrophotalea carbinolica: Pcar_1020
Help
Entry
Pcar_1020 CDS
T00285
Name
(GenBank) ATP-dependent protease, putative
Organism
pca
Syntrophotalea carbinolica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_32
LonB_AAA-LID
LonC_helical
Lon_C
AAA_22
AAA_lid_3
Pex19
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ABA88270
UniProt:
Q3A5T7
LinkDB
All DBs
Position
1196293..1198704
Genome browser
AA seq
803 aa
AA seq
DB search
MEQFKLSPQELFWKCDAAQFEFSSTDELRFLEETIGQERALTAIEFGLSIDSNGFNIFVL
GESGTGRSSTIKRVLERRCKDEPVPDDWCYVHDFKNADRPNCVRLAAGLGKTFQGDMETL
ISHLAEAIPRLFESKEYEQAKNSITQESQEKNKKLVQELEAKVNAEGFLLQRTVGGLVLV
PTRDGQPLSQQEYGELDEKEQQELEEKGGRLQEMLNDTLRQIVELEKRLRISLHEMEKNF
LNTALQHLFEDLEEKYKDHARVLEHLGNCRADLLNRADEFRPSQGPQVALGGMRTGRQEP
SFDQYRVNLLVDNGALEGAPVVYEPNPTYFNLFGRIEHIIQMGNATTNFTMIKSGALHRA
NGGYLIVDCREVLINLFSYEAIKRCLRHGEIKIEDMAEQYRLIATVSLKPEPIPLKCKLV
MIGLPMFYYLLYQLDPDFRKYFKVKSDFNSIMKNTWENVQHYALFIATQCRKEGMLHFSP
EGVASVVEYAARLAEDKNRLSCRFMDLSDLIREASFYAVRNRAEKVERSHVELAVESKEY
RSNKLEQLVQEFIEDGRILVDTAGEVVGQINGLAVYLMGDYSFGKPSRITVRTFMGKGGV
INIEREAKLSGPVYDKGVLILSGFIGDRYAQDKPLTLAASICFEQSYSGVEGDSASAAEL
FGLLSSLAGLPLRQGIAVTGSVNQRGQLQPIGGVNEKIEGFYAVCKAKGFTGQQGVLIPD
QNRQNLMLKQEVVDAVEAGQFHVWAVRHIDEGLEILTGIPAGQQLEDGTWPEGTVNYRVN
ARLEDMVKGLQKFARPEEKNSQS
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggagcaattcaagctttcacctcaggaacttttttggaagtgcgatgcggcgcaattc
gaattttccagtaccgatgagcttcgttttctggaagaaaccatcggccaggaacgcgcc
ttgacggcgatcgaattcgggctgagcatcgattccaacggtttcaatatcttcgtgctg
ggagagtccggcaccggacgttcctcaactatcaagagggtgttggagcgtcgctgcaaa
gatgagcctgtccctgacgattggtgctatgtgcatgatttcaaaaatgcggaccggccc
aattgcgttcgtttggccgcgggactcggaaaaaccttccagggggatatggagaccctt
atcagccatctcgccgaagctatcccaaggcttttcgaaagcaaggaatacgagcaggca
aaaaacagcattactcaggagtcccaggaaaaaaacaagaaactggttcaggaactggag
gcgaaagtcaatgccgaaggttttcttttgcagcgcactgtgggcggtttggtgctggtt
ccgacccgtgacgggcagccgttgtcgcagcaggaatatggcgaattggatgaaaaggaa
cagcaggaacttgaagagaagggcggccgtttgcaggaaatgcttaacgataccctgcga
cagattgtggagttggagaaacggctgcgtatttctctgcatgaaatggaaaagaatttt
ctgaatacggccttgcagcatttgttcgaggacctggaagagaagtacaaagatcacgcc
agggtgctggaacatttaggtaactgccgcgcggaccttctcaacagggccgacgaattt
cgccccagccagggcccgcaggtggctctcggcggtatgcgtacgggtcgccaggaacct
tccttcgatcagtatcgggtgaacctgttggtcgataacggtgccctcgaaggggcgccg
gtcgtctatgaacccaatcctacctatttcaacctttttggccgtatcgaacacatcatc
cagatgggcaatgccacgaccaatttcaccatgatcaaatcgggggctctgcatcgtgcc
aacggcggttacctgattgtcgattgtcgtgaggtccttatcaatctgttctcctatgaa
gccatcaagcgctgcctgcgccacggcgaaatcaagatcgaggatatggcggagcagtat
cgcctgatcgccacggtgtccttgaaaccggagccgattcccttgaaatgtaaactggtg
atgatcggtttgcccatgttttattacctgctttaccagttggatccggattttcgcaaa
tatttcaaagtcaaatccgattttaacagcatcatgaaaaatacatgggagaatgtgcag
cattatgctttgtttatcgcaactcaatgccgcaaggaaggtatgctgcatttttcccct
gaaggcgtggccagcgtggtcgaatatgccgcccgcctggccgaagataaaaatcgcctg
tcctgccgtttcatggatctgtccgatctgatccgggaggcttcgttttacgcggtgcgt
aaccgggcggaaaaggtggaacgcagtcatgtggaattggccgtggagtccaaggagtat
cgctccaacaagctcgagcaactggtgcaggagtttattgaagacgggcgcatcctggtc
gataccgccggagaggtggtcggtcagatcaacggcctggcggtgtatctgatgggcgat
tattctttcggcaaaccttcgcgtattaccgtgcgtacctttatgggcaagggaggcgtg
attaatatcgaacgcgaggccaaactttccgggcctgtttacgataagggcgtgcttatc
ttgtccggttttatcggcgatcgatatgctcaggataaacctctcaccctggccgcgtcg
atctgcttcgagcaatcctactcaggcgtcgaaggggacagcgcatcggctgcggaattg
ttcggtttgctgtcttctttagccggtctgcctttgcgtcaggggatcgctgtcaccgga
tctgtcaatcagcgcggtcagttgcagccgataggcggcgtcaatgaaaagatcgaaggt
ttttatgccgtttgcaaagccaagggctttaccggtcagcagggggtgctgattccggac
cagaacaggcagaatctgatgctcaagcaggaggttgtcgacgctgtagaagccgggcaa
tttcatgtatgggcggtgcggcatattgacgaggggctggaaatacttaccggcataccg
gccggccagcaacttgaagatgggacatggcccgagggaacggtgaattatcgcgtcaat
gcccgactggaggacatggtcaaagggctgcagaaatttgctcgtcccgaagaaaaaaac
tcgcaatcataa
DBGET
integrated database retrieval system
