Pediococcus claussenii: PECL_540
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Entry
PECL_540 CDS
T01713
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
pce
Pediococcus claussenii
Pathway
pce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PECL_540 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pce03400
]
PECL_540 (uvrA)
DNA repair and recombination proteins [BR:
pce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PECL_540 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PECL_540 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
nSTAND3
AAA_22
RsgA_GTPase
AAA_23
AAA_21
AAA_33
APS_kinase
AAA_18
DnaJ_CXXCXGXG
AAA_24
Viral_helicase1
NACHT
AAA_15
T2SSE
cobW
MMR_HSR1
PRK
DUF87
MeaB
NTPase_1
Septin
NB-ARC
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
AEV94841
UniProt:
G8PC22
LinkDB
All DBs
Position
544838..547687
Genome browser
AA seq
949 aa
AA seq
DB search
MANDKIVIHGARSHNLKDIDVTIPRNKMVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLS
AYARQFLGQMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLWARVGHP
ICPNDGTEITSQTVEQMVDRVLALEERTRIQIMSPIIRGKKGQHKKVFEKVKREGFVRVQ
VDGETYDVDEVPDLNKNQAHTIDVVVDRVVVKDGIRSRLFDSFEAALRLSDGYATADILD
GEPILFSEHYSCPICGFTVGELEPRLFSFNAPFGACPDCDGLGVKLEVDTDLVVPDPSLT
LRKGAIAPWNPISSQYYPSMLEQAAESFGIDMDVPFENLKKSEQDIVLYGSQGKKFHFHY
ENDFGGVRDVDAEFEGVVSNVNRRYAETNSDFTRDQMRLYMRELTCQTCHGYRLNRQALS
VKIAGKHIGEVSELPVDESILFFKGVELSDQESQIAAPVLKEINDRLTFLGNVGLDYLTL
SRSARTLSGGEAQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLISSLKKMRDLGNT
LVIVEHDEDTMLASDYLIDIGPGAGENGGQVMAAGTPKQVMRSTKSLTGQYLAGKKFIPF
SPDRRSGNGKKIRLTGASENNLKNVSVDFPLGEFIAVTGVSGSGKSTLVNMVLKRALAQK
LNNNSEKPGKFKKITGVENIEKVINIDQTPIGRTPRSNPATYTSVFDDIRGLFAQTNEAK
LRGYTKGRFSFNVKGGRCEACKGDGILKIEMNFLPDVYVPCEVCHGQRYNSETLEVKYKG
KNIAEVLNMTVEEAAKYFEAIPKIARKLQTIIDVGLGYVHLGQSATTLSGGEAQRMKLAA
ELHKKANGRNFYILDEPTTGLHTDDIKRLLDVLQRLVDNGNTVLVIEHNLDVIKTADHLI
DLGPEGGAGGGEIIATGTPEDIAKASNSYTGQYLKPILERDLNRMKKIK
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaacgataaaatagttattcatggggcaagatctcataatttaaaagatattgat
gtaacaattccaaggaataagatggttgtcgtaactggattatctgggtcgggtaagagc
tcactagcttttgatacactgtatgctgaaggacaacgacgatatgtagaaagtttatca
gcatatgcacgtcagtttttaggacaaatggataaaccagatgtggattcaatcgatgga
cttagtcctgccatttcaattgatcaaaaaacaacttccaagaatcctcgttcaacagtg
gggacggttacggaaattaatgattatcttcgtctcttatgggcgagagttggacatcca
atttgtcctaacgacggcacggagattacgagtcaaactgttgaacaaatggttgatcgt
gtattagcactggaagaacgtactcgcatccaaattatgtcaccaattattcgtggaaaa
aagggacaacacaaaaaagtttttgaaaaggttaagcgggaaggctttgttagagtacaa
gttgacggggaaacatatgatgttgacgaagttcctgatctaaataagaatcaagcgcat
actatcgatgtagtagttgaccgtgttgtggtaaaggatggaatacgttcccggctattt
gactcttttgaagctgccttacgattaagcgacggttatgcgacggcagatattttagat
ggtgaaccgattcttttttctgaacattattcttgccctatttgtggttttacggttggt
gagttagagccaagattgttctcatttaatgcaccatttggggcatgcccagattgtgat
gggttgggtgtgaagttagaagtagatacagatttagttgtaccagacccaagcttaacg
ttacgcaaaggagcaattgcaccttggaatcctattagttcacaatattatccatctatg
cttgaacaagcagctgagagttttggaattgatatggatgttccctttgagaatttaaaa
aagtcagaacaagatattgttttgtatggttcacagggtaaaaaatttcattttcattat
gaaaatgattttggcggtgtgcgtgatgtcgatgcggagtttgaaggggttgtgagtaac
gttaacaggcgttatgctgagaccaatagcgactttacaagggaccaaatgcgactatac
atgcgtgaattgacttgtcaaacttgtcatgggtatcgtttaaatcgtcaagcactttcc
gtaaaaattgctggaaagcatattggtgaggtttctgaattacctgttgatgagagcatt
ttattttttaagggtgttgaattatcagatcaagaatcacaaattgcagctcctgtactg
aaagaaatcaatgatcgtttaacgtttttaggtaatgttggattagattacttaacgttg
agcaggtcagcacgtacactatctggtggtgaggctcaacgaattcgtttagcaacgcag
attggttcgaatttgtctggtgtactttatattttagatgaaccttcaattgggttacat
cagcgtgataatgatcgtctaattagttccctcaaaaaaatgcgtgatttggggaataca
ttagtaattgttgagcatgatgaagataccatgttggcatctgattatttaattgatatt
gggcctggtgctggtgaaaatgggggtcaagtaatggctgcgggaactccaaagcaggtt
atgcggtcaacaaaatcattaacgggacagtatttagctggcaagaagtttataccgttt
agtcctgataggcggagtggcaatggtaaaaaaataagattgactggtgctagtgaaaat
aacttaaagaacgtaagtgttgatttcccactgggcgaattcattgcagttactggagtg
tctgggtcaggtaagtctactttagtaaatatggtattaaaaagggctttagctcaaaaa
cttaacaataattctgaaaaacctggcaagtttaaaaaaattactggtgttgaaaatatt
gagaaagttatcaatattgatcaaactccgattggtagaacgcctcgaagcaatcctgcg
acatataccagtgtttttgacgatataagaggtctttttgcacaaacgaatgaggcaaaa
ttaaggggatacactaagggtcgctttagtttcaacgtaaaaggtggacgatgtgaggcc
tgtaaaggtgatggaatccttaagatcgagatgaactttttaccagatgtttacgtgcct
tgcgaagtctgtcatgggcagcgctataactctgagaccctcgaggttaagtataagggg
aagaacattgctgaagtactgaatatgacagttgaagaagcagccaagtattttgaagca
attccgaagatcgcccgtaagttacaaactattattgatgtcggtttaggatacgttcat
ttgggacaatcggctacaactttatctggtggggaagctcaacgaatgaagttagctgcc
gagttgcataagaaagccaatggacgcaatttctatattcttgatgaaccgactactgga
ctgcataccgatgatattaaacgcttattggatgtactacaacgattggttgataatgga
aataccgtattagtaattgaacataacctggacgtgattaaaacggcagaccatttaatc
gatctcggacctgagggaggagctggtggcggtgaaattattgcgaccgggactcctgaa
gatatcgctaaggcttccaacagttacacgggacagtatcttaaaccaattttggagaga
gatttaaaccgtatgaaaaaaattaaataa
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