KEGG   Pseudomonas chlororaphis PA23: EY04_04915
Entry
EY04_04915        CDS       T03201                                 
Name
(GenBank) ssDNA exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pch  Pseudomonas chlororaphis PA23
Pathway
pch03410  Base excision repair
pch03430  Mismatch repair
pch03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pch00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    EY04_04915
   03430 Mismatch repair
    EY04_04915
   03440 Homologous recombination
    EY04_04915
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pch03400]
    EY04_04915
DNA repair and recombination proteins [BR:pch03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     EY04_04915
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     EY04_04915
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      EY04_04915
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB Glyco_transf_4
Other DBs
NCBI-ProteinID: AIC18246
LinkDB
Position
1126327..1128036
AA seq 569 aa
MRIEPRELPATLPFLGDLPPLLTRLYAARGVQSEAELDKSLARLIPFQQLKGIEAAVDLL
VTALEQRERILIVGDFDADGATASTVGMLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVAV
ALERQPQLLITVDNGISSVEGVAAAKAAGLKVLVTDHHLPGHELPAADAIVNPNQPGCEF
PSKALAGVGVIFYVLMALRTRLRSLGWYETKPQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGIKAILEVAKREASRITSTDLGFILGPRLNAAGRLDDMSLGIEC
LLSHDMALAREMAGQLDELNQDRKSIEQGMQREALAQLKDLPVESMPFGLCLFEPDWHQG
VIGILASRLKERYHRPTIAFADAGEGMLKGSARSVPGFHIRDALDAVAAKHPDLISKFGG
HAMAAGLSLPEQNFPAFAEAFDAEVRRQLREEDLTGRLLSDGTLAVEEFHLELARALRHA
GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLRSECGSVKLDGIAFGIDRDIWPNPTIR
WVELAYKLDLNEFRGQETVQLMIAHIEPR
NT seq 1710 nt   +upstreamnt  +downstreamnt
atgcgtatcgaacctcgtgagttgcccgccaccctgccgtttctcggtgatctgccgccg
ttgctgacccgcctgtacgccgcccgtggcgtgcagtccgaggccgagctggacaagagc
ctggcgcggttgatcccgttccagcagctcaagggcatcgaggcggcggtggatctgctg
gtgacggcgctggagcagcgcgagcgcatcctgatcgtcggcgacttcgacgccgacggc
gccaccgccagtaccgtgggcatgctcggcctgcgcctgctgggcgcggcccatgtcgat
tacttggtgccgaaccgtttcgaatacggctacggcctgaccccggaaatcgtcgcggtg
gccctggagcgccagccccagctgctgatcaccgtggacaacggcatctccagtgtcgag
ggcgtggcggcagccaaggcggccgggctgaaagtgctggtcaccgaccaccacttgccg
ggccacgagttaccggcggccgatgccatcgtcaacccgaaccagcccggctgcgagttt
ccgagcaaggccctggccggggtcggggtgatcttttatgtgctgatggcgctgcggacc
cgcctgcgcagccttggctggtacgaaaccaagccgcagccgaacatcggcgaactgctg
gatctggtggcgctgggcagcgtcgccgacgtggtgccgctggacgcgaacaaccgcatc
ctggtgcaccaggggctggagcggattcgtgccgggcgcgcgcggccggggatcaaggcg
atcctcgaagtggccaagcgcgaggcgtcgcgcatcacctccaccgacctgggcttcatc
cttggcccacggctgaatgccgccgggcgcctggacgatatgagcctgggcatcgaatgc
ctgctcagccatgacatggccctggcgcgggaaatggccggccagctggacgagttgaac
caggatcgcaaatccatcgagcagggcatgcagcgcgaagccctggcccagctcaaggac
ttgccggtggagtcgatgccattcggcctgtgcctgttcgagcccgactggcaccagggg
gtgatcgggattctcgcttcgcggctgaaagagcgttaccaccggccgaccatcgccttt
gccgacgccggcgaaggcatgctcaagggctcggcgcgttcggtgccgggctttcatatc
cgcgatgccctggacgcggtggcggccaagcatccggacctgatcagcaagttcggcggt
cacgccatggccgccggcctgtcgctgccggagcagaatttcccggccttcgccgaagcc
ttcgatgccgaggtgcgccgccagctgcgcgaggaagacctgaccggacgcctgctgtcg
gacggcaccctggcggtggaagagttccacctcgaactggcccgcgccttgcgccatgcc
gggccctggggccagcactttcccgagccgctgttccatggcgtattccaattggtggaa
cagcgcgtggtcggcgagcgtcacctcaaggtggtgctgcgcagtgaatgcggctcggtg
aaactcgacggcatcgccttcggcatcgaccgcgatatctggccgaacccgaccatccgc
tgggtggaactggcctacaagctggacctcaacgagttccgcggccaggaaaccgtgcaa
ctgatgatcgcccatatcgaaccgcgttaa

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