Pseudomonas chlororaphis PA23: EY04_13140
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Entry
EY04_13140 CDS
T03201
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pch
Pseudomonas chlororaphis PA23
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pch03400
]
EY04_13140
DNA repair and recombination proteins [BR:
pch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EY04_13140
Archaeal homologous recombinant proteins
EY04_13140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
nSTAND3
ABC_tran
MMR_HSR1
cobW
AAA_22
AAA_25
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AIC19813
LinkDB
All DBs
Position
complement(2889022..2892663)
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFSAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNIGRETKVPEVDSEMLTSDPRTLLRRGTGSGYAEVDFVGIDGHRYRARWETNRARDKA
NGKLQASKQSLHDLDSNQLLASQKRDYEQLIEAKLGLNFEQFTRAVMLAQSEFSAFLKAD
DKERSELLEKLTNTSIYSQLGRRAYSKSKEAEEQHKTLKAQASGITPLEPEARAELDQRF
DAAQQQLKAQQAQLKQLELQHAWLKELQQLQGQQRSAAEQLQQAQATWEGLGSERTRLTR
LEQLAPQRHQFARQVELNQQLTPLREQIRQQRQQQGAEQQRQGELEQQLATAQAALLAAQ
EQQSAGAPLLREAFAEQSTLAHLGKTCGEAGEFKDKLQQASEQGQQAIQAMLEQQRLVGE
RLQRIAEQLEHSSHLAPLSDAWNAYRDRLQQLMLAGNRLNKGQEELPGLQQRAASAAQQL
AAQRDELQVLYSEAGAEPHAVAEQLQILSDLLQDNRKQQRAFEELARLWASQQELDKRGA
ELADKLQTAARQREELNRIGLQSKAELTVAEQALTVTQQLLERQRLARSASVEELREQLQ
DDQPCPVCGSHEHPYHQPEALLQSLGRHDESEEANARKAVDELKEKLAELRSQVGGLIAQ
QKEFLQQQEQLASQQQALAPSIEAHPLAAALLDQDAGKRDAWLNQQLIQLNQSIQQDEQR
QGALLKLQKDAARLQQQLQAAVEASQEATQQLTQQQQQLGADRQRLEEELSAFATLLPAD
TLEALRSDPAATFMQIDQQVMQRLEQLDQQKEEQQEQQQRQLALDKEQDRQQTRVQQLQA
AQEQFNTLAEQQQAARNKLAQLLGEHASAEQWQQHLEQAVEQARAADVQANQQLQEARSL
LVQLGAELQGKEERLLALEAEQQALGSKIADWRQQHPELDDGGLEQLLSLDDQQVTALRQ
QLQASEKAVEQAKVLVTEREQRLHSHQAQHDGQLDAEQLASALSELHSQLAASEQLSAEL
RAQQTEDQRRQDANQALGEQIAQAYAEWQRWARLNALIGSASGDTFRKIAQAYNLDLLVH
HANAQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSTLEVK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcttgccatccgcctgaagaacctggcctccctggccggcccctttgaaatc
gacttcagcgccgaacccctggccagcgccgggctgttcgccatcaccgggcccactggc
gccggcaagagcaccctgctcgatgcgctgtgcctggcgctgttcggcgcggtgccgcgg
ctgaacaatatcggccgcgaaaccaaggtgccggaggtggacagcgaaatgctcaccagc
gacccgcgcaccctgctgcgccgtggcaccggcagcggttacgccgaggtcgacttcgtc
ggcatcgacggccatcgctaccgcgcccgctgggaaaccaaccgcgcccgggacaaggcc
aacggcaagctgcaggccagcaagcagagcctgcacgacctggacagcaatcaactgctg
gccagccagaagcgcgactacgagcagttgatcgaagccaagctggggctcaacttcgag
cagttcacccgcgcggtgatgctggcccagagcgagttcagcgccttcctcaaggccgac
gacaaggaacgcagcgagctgctggaaaagctcaccaacacctcgatctacagccagctc
gggcggcgcgcctacagcaagagcaaggaagccgaggaacagcacaagaccctcaaggcc
caggccagcggcatcaccccgctggagcccgaggcccgcgccgagctggaccagcgcttc
gacgccgcccagcagcagctcaaggcccagcaggcgcagctcaagcaactggagctgcaa
cacgcctggctcaaggaactgcagcagttgcagggccagcagcggagcgccgccgagcaa
ctgcaacaagcgcaagcgacctgggaaggcctgggcagcgagcggaccaggctgacccgc
ctggaacagctggcgccgcaacgtcatcagttcgcccggcaggtggaactgaaccagcaa
ctgacgccgctgcgcgaacagatccggcaacagcgccagcaacaaggcgcagagcaacaa
cgccagggcgaactggagcagcaactggccacggcccaggccgcgttgctcgccgcccag
gaacagcaaagcgccggcgccccgctgctgcgcgaggcctttgccgagcaaagcaccctc
gcccacctgggcaagacctgcggcgaagccggcgagttcaaggacaaactgcaacaggcc
agcgaacaaggccagcaggcgatccaggccatgctcgaacagcagcgcctggtgggcgaa
cgcctgcagcggattgccgaacagctggaacacagcagccatctggcgccgctgagcgat
gcctggaatgcctaccgcgatcgcctgcaacagctgatgctggccggcaaccggctgaac
aagggccaggaagagctgcccggcctgcaacaacgggccgccagcgcggcgcagcaactg
gccgcgcaacgcgatgagctgcaagtgctgtacagcgaggccggcgccgagccccatgcg
gtggccgaacagttgcagatcctcagcgacctgctgcaggacaaccgcaagcaacagcgc
gcgttcgaagaactggcgcggctgtgggccagccagcaggaactggacaagcgcggcgcg
gagctggcggacaagttgcagaccgcggcgcgccagcgcgaagagctgaaccggatcggc
ttgcagagcaaggccgaactgacggtcgccgaacaggccctgacggtgacccagcaactg
ctggaacgccagcgcctggcacgcagcgccagtgtcgaagagctgcgcgagcagttgcag
gacgatcagccctgcccggtctgcggcagccacgagcacccctaccatcagcccgaagca
ctgttgcagagcctgggtcgccatgacgaaagcgaagaagccaacgcccgcaaggcggtg
gacgaactcaaggaaaagctcgccgaactgcgcagccaggtcggcggcctgatcgcccag
caaaaggaattcctccagcaacaggagcagctggcaagccagcagcaggccctggcgccg
agtatcgaagcccatccgctggcggcggcgctgctcgaccaggacgccggcaagcgcgac
gcctggctgaaccagcaactgatccagctgaaccagagcatccagcaggacgaacagcgc
caaggcgccctgctgaaactgcaaaaggacgccgcgcgcctgcaacagcaactgcaagcg
gcggtcgaggccagccaggaagccacgcaacagctgacccagcagcaacagcagctgggc
gcggatcgccaacgcctggaagaagaactgtcggccttcgccaccctgctgccggccgat
accctcgaagccctgcgcagcgacccggccgcgacctttatgcagatcgaccagcaggtc
atgcagcgcctggagcagctcgaccaacagaaggaagagcaacaggagcagcaacagcgc
cagctggccctggacaaggaacaggaccgccagcagacccgcgtgcagcaactgcaagcc
gcccaggagcagttcaataccctggccgaacaacagcaggccgcccgcaacaagctcgcg
caactgctgggcgaacacgccagtgccgagcagtggcagcaacatctggaacaggccgtg
gaacaggcgcgcgccgccgatgtgcaggccaaccagcagttgcaggaagcccgcagcctg
ctggtgcagctgggcgcggaactgcaaggcaaggaggaacgcctgctggccctggaagcc
gaacagcaggcgctgggcagcaagatcgccgactggcgccagcagcacccggaactggac
gacggcggcctggaacagctgctcagcctcgacgaccagcaggtcactgcgttgcgccaa
caactgcaagcgagcgaaaaggcagtggaacaggccaaggtcctggtcaccgaacgcgag
caacgcctgcacagccatcaggcccagcacgacggccagctcgacgccgaacaactggcc
agcgccctgagtgaactgcacagccagctggccgccagcgaacagctgagcgccgaactg
cgcgcccagcagaccgaggaccagcgccggcaagacgccaaccaggcgctgggcgagcag
atcgcccaggcctacgccgaatggcaacgctgggcgcggctcaatgccttgatcggctcg
gccagcggcgacaccttccgcaagatcgcccaggcctacaacctcgatctgctggtgcat
cacgccaacgcgcaactgcgccagctggtgcggcgctatcgcctcaagcgcggcggcagc
atgctcggcctgctggtgatggacacggaaatgggcgatgagctgcgctcggtgcactcc
ctgtccggcggcgagaccttcctggtgtccctggcgctggccctgggcctggcgtccatg
gcctccagcacgctgaagatcgagtcgctgtttatcgacgaaggcttcggcagcctcgat
ccggaatccctgcaactggcgatggacgccctcgacggcttgcaggcccagggccgcaag
gtggcggtgatttcccatgtgcaggaaatgcacgagcggattccggtgcagatccaggta
cggcgccaaggcaatggcctgagcaccctggaggtgaaatga
DBGET
integrated database retrieval system
