Pseudomonas chlororaphis PA23: EY04_15480
Help
Entry
EY04_15480 CDS
T03201
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
pch
Pseudomonas chlororaphis PA23
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pch02000
]
EY04_15480
Transporters [BR:
pch02000
]
Other transporters
Pores ion channels [TC:
1
]
EY04_15480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
Motif
Other DBs
NCBI-ProteinID:
AIC20253
LinkDB
All DBs
Position
3430163..3432655
Genome browser
AA seq
830 aa
AA seq
DB search
MLKRSTARRTAAVYRPLLLPLSIACGLASSNLGAAENASPTLDTVVVTGNRGATERTVTT
SPTPIDVVTGEQLRAVGKPSLLEALSKFIPSFNLPDRAGWDASGVVRSATLRGLTASHVL
VLVNGKRRHTSATLNINGINSGAAPSDLDLIPVASIDHIEVLRDGAAAQYGSDAISGVIN
IILKQTTGGSSDTTLGQGYDGKRGTAQEALNYGFQLGEAGVLNVSLDTRYQERDNKAGSN
GYSSHYYPLADGSPDPREAGASHHTYKGYGLPRSQLADVGYNLDLPLNDAVTLYSFSTLA
TRENNDGQNFRLPNGRNTITTGPNGYPNGYSPYWLINETDFQSAFGAKGGDFGGWAWDLS
STYGRNYAKQRTYDNQNPSLGENTPNKFTSGIYIADQLTSNLDLKRSYEIGLVKPLDVAF
GFEHRRESYETRAGSEASYIDGGYVFPAGHPRAGQRPDPGAQVTNGISPEDEQKISRSSV
ASYIDLGFYPVEHWYVGVAARYEHYNEGVGATRSGKLSTRYEFNPVFALRGTISNGFRAP
SLANQIFTARSTGFDTINGVYQSYNYVILPVDSAGAQALGAQSLKPERSTNFSLGFALTP
SDDLSLTVDGYVINLRDRLVLSERFQGPGVAALLDSIGVPATAGAQYFTNGANTRTSGVD
VVGNYRQDLARYGSVKWTAALNYNHTQILSVSDTPAQLSALGSNFQLLGRQSRALLTKTS
PSSKMIFSADWAIRDFDVNLRLTRYGTYTEVNSSSNPDLDREYSAKWITDLDVAYAFDKQ
LTVAVGAQNLFDKYPDPIGVSNSSFGDNWGSYSPFGFTGGYYYTRVQYAF
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagcgctcaactgcccgacgtactgcagcggtctatcgcccgttgttgctgccg
ctgtcgattgcctgcggcctggcttcatccaacctgggggccgccgaaaacgcctcgccg
accctcgacacggtggtggtcacgggtaaccgtggcgccaccgaacgcaccgtgaccacc
agcccgacgccgatcgacgtggtcaccggcgagcaactgcgggcggtgggcaaacccagc
ctgctggaggcgctgagcaagttcatcccgtccttcaacctgcccgaccgcgccggctgg
gacgccagcggcgtggtgcgttcggccaccctgcgcgggcttaccgcctcgcatgtgctg
gtgctggtcaacggcaagcgccggcacaccagcgccactttgaacatcaacggcatcaac
agcggcgcggcgcccagcgacctcgacctgatcccggtggcgtccatcgaccatatcgag
gtgctgcgcgacggcgcggcggcgcagtacggctcggacgcgatatccggggtgatcaat
atcatcctcaagcagaccaccggcggcagttccgacaccaccctcggccagggctacgac
ggcaagcgcggcaccgcccaggaggcgctcaactacggcttccagctcggcgaggccggg
gtgctgaatgtctccctcgacacccgttaccaggagcgcgacaacaaggccggcagcaac
ggctacagcagccattactacccgctggccgacggctcgcccgacccgcgcgaggccggc
gccagccaccacacctacaagggctacggcctgccccgcagccagctggccgatgtcggc
tacaacctcgacctgccgctgaacgacgccgtgaccctgtattcgttctcgaccctggcg
acccgggagaacaacgacggccagaacttccgcctgcccaacggccgcaacaccatcacc
accggccccaatggttatcccaacggctacagcccgtactggctgatcaacgaaaccgac
ttccagtcggcgttcggcgccaagggcggggacttcggcggctgggcctgggacctgagc
agcacctacgggcgcaactacgccaagcagcgcacctacgacaaccagaacccgtcgctg
ggggaaaacaccccgaacaagttcacctccggcatctatatcgccgaccagctgaccagc
aacctggacctgaagcgcagctacgagatcggcctggtcaagccgctggacgtggccttc
ggcttcgagcaccggcgcgaaagctacgagacccgcgccggctccgaagcctcctatatt
gatggcggctatgtgtttcccgccggccacccgcgcgccgggcaacgccccgatccgggc
gcccaggtgaccaatggcatcagccccgaggatgagcagaagatcagccgcagcagcgtc
gccagctacatcgacctgggtttctaccccgtggagcattggtatgtcggcgtcgccgcg
cgctacgagcactacaacgaaggcgtgggcgccacccgcagcggcaagctcagcacccgc
tatgagttcaacccggtgtttgcgctgcgcggcaccatcagcaacggctttcgcgcgccg
tccctggccaaccagatcttcaccgcccgttcgaccggcttcgacaccatcaatggcgtc
taccagtcctacaactacgtgatcctgccggtggactcggccggcgcccaggcgctgggc
gcgcagtccctgaagccggagcgctcgaccaacttcagcctggggtttgccctgaccccc
agcgacgacctgagcctgaccgtggacggctacgtgatcaacctgcgcgaccgcctggtg
ctcagcgaacgcttccagggccccggcgtcgccgccctgctcgacagcatcggcgtgccc
gccaccgccggcgcgcagtacttcaccaacggcgccaatacccgcacttccggggtcgat
gtggtgggcaattaccggcaggacctggcccgctacggctcggtgaaatggaccgcggcg
ctgaactacaaccacacgcaaatcctcagcgtcagcgacacccccgcgcaactgagcgcc
ctgggcagcaacttccagctgctgggacggcagtcgcgggcgctgctcaccaagacctcg
cccagcagcaagatgatcttctccgccgattgggcgatccgcgacttcgacgtcaacctg
cggctgacccgctacggcacttacaccgaggtcaacagctcgagcaacccggacctggac
cgcgagtactcggccaagtggatcaccgacctggacgtggcctatgccttcgacaagcaa
ctgaccgtggcggtgggcgcgcagaacctgttcgacaagtaccccgaccctatcggcgtg
agcaactcgtcgttcggcgataactggggcagctattcgcccttcggcttcaccggcggt
tactactacactcgggtgcaatatgccttctga
DBGET
integrated database retrieval system
