Pseudomonas chlororaphis PA23: EY04_16620
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Entry
EY04_16620 CDS
T03201
Name
(GenBank) transcriptional regulator
KO
K02525
LacI family transcriptional regulator, kdg operon repressor
Organism
pch
Pseudomonas chlororaphis PA23
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pch03000
]
EY04_16620
Transcription factors [BR:
pch03000
]
Prokaryotic type
Helix-turn-helix
LacI family
EY04_16620
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Ortholog
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
TetR_N
HTH_IclR
HTH_24
TusA
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AIC20471
LinkDB
All DBs
Position
3700656..3701684
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AA seq
342 aa
AA seq
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MNSFSAAQRSRVTMLDVAERAGVSKASVSRFIGEDRALLSDAIALRIEQAIAELGYRPNQ
MARGLKRGRTRLIGMLVADIRNPYSIAVMHGVETACRQHGYSLVVCNTDRDDEQERQHLA
NLRSYNIEGLIVNTLGHHLDELRELHREMPMVLVDRKVEQLHSDLVGLDNPQAVRSAIEH
LQERGYRDLLLVSEPHDGTSSRIERSNSFKAQIEQRPALQGAAVETGAALNQQLQAFLAA
PGPGPKALFCANGVAALAATRALRELGCALFDEIGLIALDDLDWYPLVGTGITALAQPTE
RIGASAFECLLKRLRGDVEPLRVLDFPAELIVRGSTRQRGTL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgaacagtttttccgccgcccagcgcagccgcgtcaccatgctcgatgtcgccgaacgc
gccggggtctccaaggccagcgtgtcgcgctttatcggcgaagaccgcgccctgctctcc
gatgccatcgccctgcgcatcgaacaggcgatagccgaactgggctaccgcccgaaccag
atggcccgcggcctgaaacgcgggcgcacgcgcctgatcggcatgctggtggccgatatc
cgcaacccctattcgattgccgtgatgcatggcgtggaaaccgcctgccgccagcacggc
tacagcctggtggtgtgcaacaccgaccgcgacgacgagcaggaacgccagcacctggcc
aacctgcgctcgtacaacatcgaagggctgatcgtgaacaccctcggccatcatctggac
gaactgcgcgaactgcatcgggaaatgcccatggtcctggtggaccgcaaggtcgagcag
ctgcacagcgacctggtcggcctggacaacccgcaagccgtgcgcagcgccatcgaacac
ctgcaagagcgcggctaccgcgacctgctgctggtcagcgaaccccatgacggcaccagc
tcgcggatcgagcgcagcaacagcttcaaggcgcagatcgagcagcgcccggccttgcaa
ggcgcggcggtggaaaccggtgccgcgctgaaccagcaactgcaagcgttcctcgccgcc
cccggccccgggccgaaagccctgttctgcgccaacggcgtcgccgccctggccgcgacc
cgggccttgcgcgagctgggctgcgcgctgttcgacgagatcggcctgatcgccctcgac
gacctcgactggtatccgctggtgggcaccggcatcaccgccctcgcccagcccaccgaa
cgcatcggcgccagcgccttcgagtgcctgctcaagcgcttgcgcggcgatgtcgagccg
ctgcgggtgctggacttcccggccgagctgatcgtccgcggctccacccgacagcgagga
accctataa
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integrated database retrieval system
