KEGG   Pseudomonas cichorii: PCH70_47630
Entry
PCH70_47630       CDS       T03002                                 
Name
(GenBank) DNA/RNA helicase, superfamily II
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
pci  Pseudomonas cichorii
Pathway
pci03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pci00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PCH70_47630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pci03019]
    PCH70_47630
Enzymes [BR:pci01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     PCH70_47630
Messenger RNA biogenesis [BR:pci03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     PCH70_47630
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25 P-loop_SecA
Other DBs
NCBI-ProteinID: AHF69916
LinkDB
Position
5510705..5512597
AA seq 630 aa
MSFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL
ERLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDNFKLYARDLKFVSACIFGGVGMN
PQVQAMARGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLAR
LPAKRQNLLFSATFSNDITALAGKLLHNPERIEVTPPNTTVERIEQRVFRLPANHKRSLL
AHLITQGAWEQVLVFTRTKHGANRLAEYLDKHGLSAVAIHGNKSQNARTKALADFKAGDV
RIMVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRTGEAISLVAPDEEKL
LKSIERMTRQKIPDGDLMGFDINAVEAEKPEVRERPDVRNPRSARAPRAEGEKSSNNGGR
RDKGKDKGKEKPAAAAASGERPARQPRERKPREGTPREQRHSQPPRPSPDRAPDEFRDDE
VDNFGNRADYVSPYQGKNQGRGRRPGAPAAPGAAPAGAGRPQGSGRPANPRSSGAGTGTG
APAKRNGSGSGPRTGGGARDGQPRNRRPARDDQPRQEPAVRSSREGQQPQPKIVHKESKI
DRFPSAEQLDQLPSRPRGEKPALLTRNRDS
NT seq 1893 nt   +upstreamnt  +downstreamnt
atgtcctttgcttccctcggtctctccgaggctttagtccgcgccatcgaggcagcgggc
tatacccagcctactccggtgcaacagcgggccattcccgccgtgttgcaaggtcgcgac
ctgatggttgcggcacagacaggtactggtaaaaccggtggcttcgccctcccgattctg
gagcggttgttccccaacggtcacccggacaaatcccagcgtcatggcccgcgccaaccc
cgcgtactggtcctgaccccaacccgcgaactggctgcgcaggtgcatgacaacttcaag
ttgtatgcccgcgacctgaagttcgtcagcgcctgcatcttcggcggcgtcggcatgaac
ccgcaggtccaggccatggcccgtggcgtggacgtgctggtcgcctgcccgggccgcctg
ctcgacctggccggacaaggcagcgtcgatctgtcccacgttgaaatcctggtgctcgat
gaagccgaccggatgctcgacatgggcttcgtccatgacgtgaaaaaggtccttgcccgc
ctgccggccaagcgccagaacctgctgttctcggcaacgttctccaacgacatcaccgcc
ctggcaggcaagctgctgcacaaccccgagcgcatcgaagtcacgccaccgaacaccacg
gtcgagcgtatcgagcaacgggttttccgcctgccagccaaccacaagcgttcgctgctg
gcccacctgatcactcagggcgcatgggagcaggttctggtcttcacccgcaccaagcac
ggcgccaaccgcctggccgagtacctggacaagcacggcctcagcgctgtcgcgatccac
ggcaacaagagccagaacgctcgtaccaaagccctggccgacttcaaggccggtgacgta
cggatcatggtcgccaccgatatcgccgcccgcggcctggatatcgaccagttgccacac
gtggtcaacttcgagctgccaaacgtcgatgaagactacgtgcaccgcatcggtcgtacc
ggccgtgcaggccgcaccggcgaggccatctcgctggttgcgccggacgaagaaaaactg
ctcaaaagcatcgagcgcatgacccgtcagaaaatccctgacggcgacctgatgggtttc
gacatcaatgcagtcgaggctgaaaagcctgaagttcgtgagcgtccggacgttcgcaat
ccacgctcagcccgtgccccacgtgctgaaggcgaaaagagcagcaacaacggcggccgt
cgcgacaagggcaaggacaaaggcaaggaaaagccggcagcagccgcagcgtccggcgaa
cgtccggcacgccagccgcgtgaaagaaaacctcgcgaaggcacgccacgcgagcagcgt
cattcgcaaccgccacgtccatcgcctgatcgcgcacctgacgagtttcgggatgacgaa
gtggataacttcggcaaccgcgctgactatgtaagcccttatcaaggcaagaaccagggc
cgtggccgtcgtcccggagcccctgccgctccaggcgcagcaccagctggcgccggacgc
ccacaaggttcgggccgccctgccaacccacgtagctctggtgcaggtactggcaccggc
gcacccgccaagcgtaatggctcgggttccggcccgcgcactgggggcggtgcccgtgat
ggtcagccacgcaatcgccgtccggcacgtgacgatcagccacgtcaggaaccggccgtt
cgcagctcccgtgaaggccagcaacctcagccgaaaatcgtgcacaaggaatcgaaaatc
gaccggttcccgtctgccgagcagctcgatcagttgccaagccgaccacgcggtgaaaaa
ccggccttgctgactcgcaaccgcgatagctga

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