Pyrobaculum calidifontis: Pcal_0054
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Entry
Pcal_0054 CDS
T00483
Name
(GenBank) tRNA pseudouridine synthase B
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
pcl
Pyrobaculum calidifontis
Brite
KEGG Orthology (KO) [BR:
pcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcl03009
]
Pcal_0054
03032 DNA replication proteins [BR:
pcl03032
]
Pcal_0054
Ribosome biogenesis [BR:
pcl03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
Pcal_0054
Prokaryotic type
Pcal_0054
DNA replication proteins [BR:
pcl03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
Pcal_0054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
PUA
DKCLD
Pus10_C
UPF0113
Motif
Other DBs
NCBI-ProteinID:
ABO07494
UniProt:
A3MS77
LinkDB
All DBs
Position
54370..55371
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AA seq
333 aa
AA seq
DB search
MKCGSREVFVKLEEGTNPQWGKPPSSRSAEEHIRYSFLILDKPRGPTSHEVAAWVKKILG
VERAGHSGTLDPKVSGVLPVAVAEGTKVLMALSRADKVYIAVAKFHGDVDVENLRRVLQE
LQGEIYQKPPLRSAVKRQLRTRRVYSLELLELDGRYAVLKMHVEAGTYARKLIHDLGEIL
GVGANMRELRRVAVSCFTEDEAVTLQDLADAYYIWKKYGDDTYLRRVLLPIEEIARPLPK
IWVRDSAVDALCNGAPLAAPGVAKFEHPFSRGDLVAYFTLKGELIGIGRALVDSEEVKKM
EKGLVARTDRVVMPRGTYPPMWRRGGKSFKSGT
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
gtgaagtgcggcagtagggaggtttttgtaaaactggaggaggggacgaatccgcagtgg
ggcaaaccgccgtcgagtagaagcgcagaggagcacatacggtactcttttctcatttta
gacaagcccagggggccgactagccacgaggttgcggcgtgggtgaagaagattttggga
gtggagagggctgggcactcgggcactctggacccgaaggtgtccggtgtccttccagtg
gccgtggctgaggggactaaggtgcttatggctttgtctagggcggacaaggtctacata
gccgtggccaagttccacggcgatgtagacgtagaaaatctgcggagggtgttgcaggag
cttcagggggagatctaccagaagcccccgctccgctccgcggtgaagaggcaacttaga
acgcgccgggtttactccctggagcttttggagcttgacgggaggtacgcagtgctgaaa
atgcacgtggaggccggcacctatgctagaaagcttatccacgacttgggggaaatcttg
ggggttggggcaaatatgagggagctccgccgcgtggcggtctcgtgttttacagaggac
gaggccgtgactctgcaggacttggcagacgcgtactacatttggaagaagtacggcgat
gatacatatctcaggagggtgttgctcccaatagaggagatagcgagacctctgcccaag
atctgggtccgcgacagcgccgttgacgccctctgcaacggcgcccccctcgctgcaccc
ggcgtggccaagtttgaacacccgtttagccgcggcgacttagtggcctattttacgctt
aagggcgagctcataggcattggaagagcgcttgtcgacagtgaggaggttaagaaaatg
gagaaggggcttgtggcgcggaccgaccgggtggtcatgccccgcggcacctatccgccc
atgtggaggcgaggcggtaaaagctttaaaagtggcacctag
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