Pedobacter cryoconitis: AY601_0377
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Entry
AY601_0377 CDS
T04341
Name
(GenBank) Peptidoglycan-binding protein
KO
K19223
peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
Organism
pcm
Pedobacter cryoconitis
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcm01002
]
AY601_0377
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcm01011
]
AY601_0377
Peptidases and inhibitors [BR:
pcm01002
]
Cysteine peptidases
Family C40
AY601_0377
Peptidoglycan biosynthesis and degradation proteins [BR:
pcm01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
AY601_0377
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Gene cluster
GFIT
Motif
Pfam:
LysM
Motif
Other DBs
NCBI-ProteinID:
AMP97340
UniProt:
A0A127V7V0
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Position
complement(418347..419636)
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AA seq
429 aa
AA seq
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MQKLYIPLLFGLILNVSAVKANNLRDSVGVENLNGKKLILHQVAAKDTYYSLGRRYNVSP
KEIIAYNENKFLSIGVLVKVPTNVPFSGPAQVPAAKTVTTKHVEPAKQNAIVNKPAETTQ
DTGNSEFTEHAVQPKENLMMLARQYGTTVADIKRINELKTINLKIGQILKMPVKAGAETT
SLTPVQTAPAQTVQTKPVVTTPVTPAHPTPQPTPVTVQEKKPEIVKKSEAPVVKSEPVTP
VRQGTPDKNQFLEHTVASNETMYSIATRYNLTLDQLKAKNNLTTNSLYVGQKLLINGQYP
VKSERTSDSDPKDADTIDSVKNPSLRLPASRYGLSQMDEKGAGVWIMDKDLDSSKMLVLH
RTAPIGTIMKITNPMSNRSTFAKVVGKFTENESTKDVIIVVTKAVADALGALDKRFLCNL
TYSGQANEQ
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaattatatataccgttattatttggtcttatcctgaacgtatcagcagttaag
gctaataatctaagagattccgtaggtgttgagaatctgaatggcaaaaagcttatttta
caccaggttgccgctaaagacacttattactcccttgggagaagatataatgtaagcccg
aaggaaatcatcgcttataatgagaataaattcctctctattggagttttagtcaaagta
ccaacaaatgtccctttctcagggcctgctcaagttcccgcggccaaaacagtaacgacc
aaacatgttgaacctgccaaacagaatgcaatagtaaataaaccagcagaaacgactcag
gatactggaaattcagaatttaccgaacatgcggtccagcctaaagaaaatttaatgatg
ctggccagacaatatggtacaacagtagcagacattaaaagaatcaatgaactgaagacc
attaatcttaaaattggtcagattttaaaaatgcctgtgaaagccggtgcagaaacaact
tctttaacgccggtacaaacagcaccggcacaaactgttcagaccaaaccagtagtgact
actccggttacacctgcacatccaacacctcagccaacaccagttacggttcaggagaaa
aaacctgaaattgtaaaaaaatcagaagcacctgttgttaaatctgaaccagttacgcca
gtacgtcaaggcactccggacaagaaccaattcttagaacatacagtggcttctaatgaa
accatgtactctatagccaccagatacaatttaacacttgatcaattaaaagctaaaaac
aatttaacaaccaactctctttatgttggtcagaaattactaataaacggacagtatccg
gttaaaagtgagcgtactagtgactcagacccaaaagatgccgacactatagattctgtt
aaaaacccttcattaagattaccagccagccgttatggactgagtcaaatggatgaaaaa
ggtgctggagtatggatcatggataaagatttagactcttcaaaaatgctggtacttcat
cgtactgcacctatcggaactatcatgaaaatcactaatccgatgagcaacagatctacg
tttgcgaaggttgttggtaaatttactgagaatgagtccacaaaagatgttattattgta
gtcacaaaagcggtagccgatgcattgggcgcattggataaaaggtttttgtgcaattta
acgtacagtggacaagcgaatgaacaataa
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