KEGG   Phanerochaete carnosa: PHACADRAFT_112021
Entry
PHACADRAFT_112021 CDS       T03128                                 
Name
(RefSeq) hypothetical protein
  KO
K12852  116 kDa U5 small nuclear ribonucleoprotein component
Organism
pco  Phanerochaete carnosa
Pathway
pco03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PHACADRAFT_112021
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pco03041]
    PHACADRAFT_112021
Spliceosome [BR:pco03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    PHACADRAFT_112021
 Complex C
   U5 SnRNP specific factors
    PHACADRAFT_112021
SSDB
Motif
Pfam: GTP_EFTU EFTUD2 EFG_C EFG_IV GTP_EFTU_D2 EFG_III MMR_HSR1 SRPRB GBP
Other DBs
NCBI-GeneID: 18907650
NCBI-ProteinID: XP_007390843
JGI: Phaca1_112021
UniProt: K5WQC5
LinkDB
Position
Unknown
AA seq 982 aa
MASFEDYDEFGNYIGADIDSDDEEEISQPYAQQQREPSAQPLEGFDDVLMEAADEGALMQ
VDEPVHNAVILHEDKQYYPTAQQVYGEDVETLVQEEDAQPLSEPIVAPIKVRRWTVEEKN
MPETRFDKGFLLQMTGFTEFVRNVAVVGHLHHGKTALMDMLVFETHKMDWDSDNQTRYTD
THVLSRERGISIKSSPMSLILQNSYGKSHLIHLIDTPGHVNFVDEVAPAIRLVDGVVLVV
DVVEGVMCNTEAIIRHCLQEGVKMTLVINKIDRLILELRIKAADAFYKIKHTLEEINTFI
SGINPDPDLRLSPENGNVAFASTDMHWCFTLRSFAQMYADTYGSLDVDAFADRLWGDIYF
DAETRKFTRKQADPEQNRTFVHFILEPLYKLYSQVLSEETDNLKGTLEGLGIHLKPVLYK
MDVRPLLKAVLDQFFGPAKGLVDMIVEHIPSPLAATADKVRRTYTGPMNSELVQAMEKCD
PEGPLMISVTKLYHTTDAQSFRAFGRVISGTLRKGVDVKVLGEGYSPEDEEDMVKAVVED
IWISEARYFVPAEEVVAGNLVLLGGVDASISKTATIAATNLEDDLYIFRPIKHMTQSVLK
IAIEPIAPSELPKMLSGLRSINKSYPLVATKVEESGEHVLIGTGELYLDCVMHDLRRLFS
EIEIKVSDPVTKFCETVLETSALKCYADTPNKKNRITMIAEPLERGIAEDVESGRVTMRM
TPKERGKFFEEKYQWDLLASRSIWAFGPDDSGPNVLLDDTLPSQVDKKLLGTVKQHITQG
FQWGAREGPLCDEPMRNVKFRILDASLAQEPIFRGGGQIVPTARRVCYSSFLMATPRLME
PVYFVEVQAPADCISAVYTVLARRRGHVTQDIPKAGSPLYTVKALIPVIDANGFETDLRT
ATQGQAFCLQMFDHWSIVPGDPTDTSIKLRPLEPASGQALARDLVLKTRRRKGLGDQIAV
SKYLDDEFVLALSASGHADLLG
NT seq 2949 nt   +upstreamnt  +downstreamnt
atggcgtcctttgaagactacgatgaattcggcaattacattggcgcggacattgactcg
gacgatgaagaggagatctctcagccgtacgcgcagcagcagcgggaaccgtctgcccaa
ccacttgagggcttcgacgatgtgcttatggaagctgccgacgagggtgcgctgatgcag
gtagacgagcccgtacataatgccgtaattctacacgaggacaagcagtattatcctact
gcccaacaagtttatggcgaggatgtcgagaccctggtccaggaagaagatgcccaaccg
ctgtcagagcccattgttgctcctatcaaggttcgcagatggacggtggaggagaagaac
atgccagaaacgcgcttcgacaaaggattccttctgcagatgactggattcaccgagttt
gtgcggaatgtcgcggtagtcggccatcttcaccatggcaaaactgcgttgatggatatg
ctagtcttcgagacgcataagatggactgggattctgacaatcagacccggtacaccgac
acccatgttctgtcaagagaacgaggtatctccatcaagtcctcgcccatgtcgttgatt
cttcagaacagctacgggaagtcacacctcattcacctcattgacacacctggacacgtg
aacttcgttgatgaggttgcgcccgctatacggctggtggatggtgtcgtcttagtggtt
gatgtcgtcgagggggttatgtgcaacacagaagctatcatccgccattgcttgcaagag
ggtgtgaagatgaccctcgtcattaacaagattgaccgcctcatacttgaactacgtatc
aaggctgcagatgcgttttacaagatcaagcacaccctcgaggaaattaataccttcatc
agtggtatcaaccccgatcctgatctccgtctcagcccagagaacggcaatgtggcgttc
gccagcaccgacatgcactggtgtttcaccctgcggtcgtttgcacagatgtatgcggac
acctatggctctctggacgttgacgcgttcgcagaccgcctctggggggatatttacttc
gatgccgagactcgtaagttcacccgcaagcaagcggatcccgagcagaatcgaaccttt
gtccacttcattctcgaaccgctctacaaactctacagccaagtgctaagtgaagagacc
gacaatctgaagggcactctcgagggcctcggcattcacctcaagccggtcttgtataag
atggatgtacgacccttattgaaagccgtgcttgaccagttctttgggccggcaaagggc
ttggtggacatgatcgtggaacatatcccgtcgcccctcgcagctactgctgacaaggtt
cgacgaacatatactggtcccatgaacagcgagctagtgcaggccatggagaaatgtgac
ccggaaggcccattgatgatcagcgttaccaaattataccatacgaccgatgcccagtca
ttcagggcattcggccgtgtcatcagcggtaccctcaggaaaggtgtcgatgtcaaagtc
ctcggtgaaggctactcgcctgaagatgaggaagacatggtcaaggccgtcgttgaggat
atctggatcagcgaggcgcggtacttcgtccctgcggaggaagtcgtcgccggtaacctt
gttttacttggtggtgtcgacgcatcgatctcgaagactgcaacgattgcagcgacgaac
cttgaggacgatctctacatcttccgaccaattaagcacatgacgcagtctgttctcaag
atcgctatagagcccattgcaccgtcggagctgcccaaaatgttgtctggtctccggagc
attaacaaatcgtaccccttggttgcgacaaaggtcgaggagagcggtgagcatgttctg
atcggtacgggtgagctgtacctcgactgcgtcatgcacgatctacggcgactgttctcg
gagattgagatcaaagtctcggaccctgttactaagttctgcgagactgtactcgagact
agtgccttgaaatgctatgcagacacaccaaacaagaaaaaccggattaccatgatcgcc
gagccactggaacgcggtattgcagaggatgtcgagagcggccgcgttaccatgcgtatg
actcccaaagagcggggcaagttcttcgaggagaagtaccaatgggatttgcttgcgtca
cggtctatctgggcgtttggtcccgacgacagcggcccgaatgtcttgcttgatgacact
ctgccgtcgcaggtggacaagaaattgctcggtaccgttaagcagcatattacgcaaggc
ttccagtggggtgcgcgtgaaggccctctttgcgacgagcctatgcggaatgttaaattc
cgaatccttgacgcaagcctggcacaagagccaattttccgaggtggtggacagattgta
cccacggcacgtcgtgtttgctactcatcgttcctgatggcaacgccgcgtctaatggaa
ccggtctactttgttgaagtacaagcgcccgcagactgcatatcggcggtttacaccgtg
ttggcacgccggcgtggtcacgtcacacaagatatcccgaaagccggctctccattgtac
actgtcaaggctctgatccctgtcattgacgcaaacggcttcgagactgacctccggacg
gcgacgcaaggtcaggcgttctgcttgcagatgttcgaccactggtcgattgtgcccggt
gatcccaccgacacgagcattaagcttcggccgcttgagcctgcatctggtcaggcgttg
gcgagggacctcgtgctcaagacgagaaggcgaaaaggtctaggcgaccaaattgccgtg
tcaaaatacttggacgacgaattcgtgctcgcgctgtctgcgtctggacatgcggatctt
ttaggctga

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