Phanerochaete carnosa: PHACADRAFT_257716
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Entry
PHACADRAFT_257716 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K14327
regulator of nonsense transcripts 2
Organism
pco
Phanerochaete carnosa
Pathway
pco03013
Nucleocytoplasmic transport
pco03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PHACADRAFT_257716
03015 mRNA surveillance pathway
PHACADRAFT_257716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pco03019
]
PHACADRAFT_257716
Messenger RNA biogenesis [BR:
pco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
PHACADRAFT_257716
mRNA cycle factors
P-body specific factors
PHACADRAFT_257716
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
18916925
NCBI-ProteinID:
XP_007396805
JGI:
Phaca1_257716
UniProt:
K5W581
LinkDB
All DBs
Position
Unknown
AA seq
1079 aa
AA seq
DB search
MKDVEALSLEKYVDELPAGVVEGISRCKTEKDVWSAVEVISALHRRFPTTFTPALISAFS
AALTAPSKAAMAALNQEQREKEDTARVTRQRPVLRVCAELALVGIIRDSPNRSGGEWIMK
VVRELLSNDPTLSSLPLLSTFLKPYSRPYLGLVPPSSSKQISAASEPGTLSEVTTKEANA
KEDGNILANGSAAPAIKEEDELVEKDIRDRFKKMCEGYFDNVCKKLVIEHNRLQEQDRRN
HEAYIRSGEIFEDRQQAYEKMTKSYEKLLASCQTLSELLYLPVPKLQTASHKADSIQIGS
NTGSLLGADSELNDDIRGGKWEDEEERRFFEDIIDLKDYVPRGVLGIEDEDKDDTHGESK
EEKEQKEKERVEEEVRKLEEELADMEVNDSVNGASALEKGDEEEGAEDDDGAATPTPGSP
KISPPGTPQMAPQGPSQLLTALLARLPDTTNRALIDQAAVDFAFLNSKAARKRLAKFMSQ
TPKNRLDVLPHYSRLIATLNKYMPDIGSELVSVLDDEFRYLQRKKNVVKELADVRRKNVA
FLSNLTKFKVVPPHVILHMFKVCLDDFSGTNIENIAMLLEGCGRFLLRSDETRQPFSKMV
ELMRRKQSMQHLDQRQLLLLENAYYQCNPPERTAIPQKERTPMELFIRHLIYDVLTKKTI
DKALRLIRKLDWNDLLVQKTLHKVFTKPWNIKYGNIALLAMLTYDLQRYYPAFSIAVVDQ
ILEDIRRGLEQNVYSINQRRVAAFKYLGELYIYRLIGSSIIFDTLWTLVTFGHPEGRPLP
GQPCPIDMPDDFFRVRLVCVLLDTCGMCFDRGAQQKKLDNFLTFFQRYIHCKDPLPMDIE
FMVSDSLEAIRPRMTLFKNFEEAALAVDEIFNTALQDAGVATGEDSGDEEDEEGNERREG
HEDEDVEAPNDSPVDERPPSPDTFVLKASTTQENLGPSEEDTAEFEKELAKMVTDNAESR
KVDKKTALALWDQTVPPPVLRKKRAEDAEEVQPNAAQEPSVMKFTLFTKRGNKPQTRELA
IPAESALAVQTRTAQMQDKVEQQQLKRLVLNYEQREEAEELRALEARNRAGAIKIRYVG
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatgtcgaggcgttatccctcgagaagtacgtggacgaactccccgcaggagtg
gtagagggcatctctcggtgcaaaactgagaaagatgtttggagtgcggtagaggtcatc
tcggcactacaccgccgtttccctacaacctttacgccagcccttatcagtgccttcagt
gctgcgctaaccgcaccctcaaaggctgctatggcggcgttgaatcaagagcaacgcgag
aaggaggatactgcccgagtgacacgacagcggcctgttctgcgtgtatgcgctgaactc
gcccttgtcggaattatcagggattcaccaaacaggagcggtggagaatggatcatgaaa
gtcgttagggaattgctttcaaacgatccgacactttcgtcccttcccctgctgtcaact
ttcctcaaaccatattctcgcccttacctcggacttgtaccaccatcgtcttccaagcaa
atatccgcagcttctgagcctggaactctgtcagaggtgactactaaggaagcgaatgct
aaggaggacggcaacatcttggccaatggttccgctgcgccagcgatcaaggaggaagat
gaattggtcgagaaggacatccgcgatcgtttcaagaaaatgtgtgagggctacttcgac
aatgtctgcaagaagctcgtgatcgaacataacaggctgcaagaacaagacagacggaac
cacgaggcatacatccggtcgggagagatctttgaagacaggcaacaggcgtacgagaag
atgaccaagagctatgagaagctgctcgcaagttgccagacgctgtccgagctgttgtat
cttcccgtgccgaagctacagactgcgtcacacaaggccgactctattcagatcggttct
aacaccggcagcttactcggggccgactcagagttgaatgacgacatacgcggcggcaag
tgggaagacgaagaagagcgccggttcttcgaggatatcattgatcttaaggactacgtg
ccccgcggcgtgctcggcatcgaggacgaggacaaagatgatacgcacggcgaaagcaag
gaagagaaggagcagaaagagaaggaacgtgtcgaagaggaggttaggaaactggaagaa
gagctcgcggacatggaagtgaacgacagtgtcaacggcgcctccgctctggaaaaggga
gacgaagaagagggcgcagaggacgatgacggggcggccacacctactcccgggtcgccc
aagatatcgccccctggcacgccgcagatggctccgcaaggaccctcacaactgctcaca
gccctcctggctcgccttccagatacaacaaatcgcgccctcatcgaccaggcggcggtc
gacttcgctttcctcaactccaaggctgcccgcaagaggcttgccaagttcatgagtcag
acaccgaagaaccgtctagatgtcttgcctcattattcgaggctaattgcgactctcaat
aagtatatgccagatattggctctgagttggtctccgtgcttgatgatgagttccgttat
cttcagcgcaagaagaatgtcgtgaaggagcttgcagacgtgcgacgcaagaacgttgcc
ttcctttccaacctcacaaagttcaaggtcgtgccgccgcacgtgatcctgcacatgttc
aaagtttgtctcgacgatttctcaggcacgaatatcgaaaacattgcgatgctactggaa
ggctgtgggcgctttttgctgcgcagcgacgagacaaggcagccgttcagcaaaatggtc
gagctcatgaggcggaagcagagcatgcaacatttagatcagcgtcagctgctactcctt
gagaatgcgtactatcagtgtaatccgcctgagcgcacagccattccacaaaaggaacgc
acgccaatggagctcttcatccgtcacctgatctacgacgtcctcacgaagaagacgatc
gacaaggcgttacgcttgatacgcaagctcgattggaacgatctgctcgtacagaaaacg
ctgcacaaggtgtttacgaagccctggaacatcaaatatggcaatattgcgctcttggcg
atgcttacgtacgacctccaacggtactaccctgcgttctcgatcgccgtcgtcgaccag
atcctcgaggatattcggcgtggtcttgagcagaatgtatacagcatcaaccagagacga
gttgcggcgttcaagtatctcggcgagctgtatatctacaggctcatcgggtcgagtatc
atcttcgacacactttggacacttgttacctttggtcatcctgagggcaggccattacct
ggccaaccgtgcccgatcgacatgccagacgacttcttccgcgttcgactcgtctgcgtg
ctcctcgacacctgcgggatgtgcttcgatcgcggcgcgcaacagaagaagctcgacaac
ttcttgacgttcttccagcgatatatccactgcaaggatccgttgccaatggacatcgag
ttcatggtttccgactcactcgaggcgattcgtccaaggatgacactcttcaaaaatttc
gaggaggctgcgctggccgtcgacgagatattcaacactgccttgcaggacgccggagta
gccactggtgaagacagtggtgatgaagaggacgaggaaggtaacgagaggagagaaggg
cacgaggatgaagatgtcgaagcgccgaacgattcaccggttgacgaacgaccaccatca
ccggatacctttgtcttgaaagcttcgaccacgcaggagaacctcggcccgtcagaagaa
gacacggccgagttcgagaaggagctcgcgaagatggtcactgataacgccgagtcgcgg
aaggtggacaagaagaccgccctcgctctttgggaccagactgttccgccgccagtcctg
cgcaagaagcgcgccgaggatgctgaggaggtccaaccgaatgccgcacaagagcctagc
gtgatgaagtttacactgtttacgaagcgtggcaacaagccacagacgcgcgagctcgct
attcctgccgagtctgctctggcagtccagacgcgtacagcacagatgcaagacaaagtg
gagcagcagcagctgaagaggctggttctgaattacgagcagcgcgaagaggccgaggaa
ttacgagccttggaggcacgcaaccgcgccggagccatcaagattcgttacgtcggatag
DBGET
integrated database retrieval system
