Phanerochaete carnosa: PHACADRAFT_29344
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Entry
PHACADRAFT_29344 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
pco
Phanerochaete carnosa
Pathway
pco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PHACADRAFT_29344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pco03400
]
PHACADRAFT_29344
DNA repair and recombination proteins [BR:
pco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
PHACADRAFT_29344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Lys-AminoMut_A
Motif
Other DBs
NCBI-GeneID:
18919589
NCBI-ProteinID:
XP_007396537
JGI:
Phaca1_29344
UniProt:
K5W561
LinkDB
All DBs
Position
Unknown
AA seq
1116 aa
AA seq
DB search
MPAFQTPLSHKDNKRKLDADSAGGPAYKRQAGVDGRGSGSGAAKPGGKHWAVQWRNPQYK
KHKTWDYDGVLVVKGNWCELLDNEDGRRVACGKPSGVEASKIEEDVEFHLGGKDVRVDNA
IKASEYMSGACFSGSVALTAPESGSSMAVHRNSGTAAKQFVPLRPNNGTGFKTPSLTRLP
SVSDNSAVRTSSPLNQNRCAPSLAASQTKAAGAGEVKPSYWYVNWRKPQHKKHKTWDGDA
YLMHKGDKLTLVAEKGLIVGTKQWDGTPIYVGYEGRMGNKDFEVDHEITRADMPTITGAE
DFDGDIELVGSQVEAAPFVEAKKPRNVVDVDTLPVKVPKAPQPVPAPAPKKSVAAASFYA
PVQQARPKGPSHDPDAPGAVVMKSPDTAHIAKYNKKNAPVVPVVIDPIIARKLRPHQIEG
VKFMYECVMAMQGHDGRGCILADEMGMGKTLQTITLVWTLLKQNPYAGLGPIVGKVMIVC
PVTLIKNWKNEFHKWLGRDRLGIFTGDKDKSTIKQFVNSRIHHVLIIGYERLRTVISELQ
YCIPPIGLIICDEGHRLKSASNKTSTMFEVLTTPRRIILSGTPIQNDLGEFHAMADFCNP
DLLGNYNNFKKLYEVPILKSRAPGCSTKERELGEARLEQLLETAKSFVLRRDASILKNYL
PPKRLHVDEYVVFITPTQLQRDIFRQILTADKLDNLVRNSTAESLALIGMLTKVSNSPIL
LKAAADKAREQGRDAEGELIKKNVFMEAARLLPERAQVDDVSLSGKLIALANLLRALYKG
TDEKCIVVSHYTSTLNIIEAFCKKKQYTYLRLDGSTAAQKRQDYVNEFNKSLQRQRFIFL
LSSKAGGVGLNLIGASRLCLIDSDWNPSQWLGYTDGTSRAVLRWHGANVLAIAEKIYQRQ
VTKLGLSDSFLGKGGSESKSDSFTRKDLRDIFTIHPNTACHTHDLLECPCEDDSGSMAST
RISSKGPTGGSNSEAEDEDEDDSSNGGFIQASAVKPKHIEKLDKEYLRQKKAQLAALGQW
THISCLRRNAVERIQDSILQKLVFVPESDERSKNSGGSAPSRVASLLEATDLEAVLQATR
PPLPVESLPGGSASFLFERTSKTAPLDGKILPEEDE
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgtttcaaaccccgctttcacacaaggataacaagagaaagctcgatgcagac
agcgcgggtgggccggcatataagaggcaggctggagtagacggccgtggaagtggcagc
ggagcagcaaaacccggaggtaaacattgggccgtacagtggcgcaatcctcagtataag
aaacacaaaacatgggactatgacggcgtcctcgtcgtcaaagggaactggtgcgagctg
ttggacaacgaggacggacgacgtgttgcctgtgggaaaccctctggtgtggaagcctcc
aagatagaagaagacgtagagttccatctcggtggcaaagacgtccgtgtggacaacgcc
atcaaggcgtcagaatacatgtctggcgcttgcttttctggaagcgttgcgctgactgct
ccagagtccggctcgagcatggctgtgcatcgcaattctggaacggctgcgaagcagttc
gtaccgctccgaccaaataatggcactggattcaagacgccttcccttactcggctgcct
tctgtctcagataacagcgccgtgaggacgtcttctccattgaaccagaaccgctgcgcg
ccttctttggcggcttcccagaccaaagcggcaggcgcgggagaagtgaagccttcgtac
tggtatgtcaactggcgcaagcctcagcacaagaagcataagacgtgggacggcgatgcc
tatcttatgcacaagggagataagcttaccttggttgcggagaaaggactaatcgtcggc
accaagcaatgggacggtaccccgatatatgttggctatgaaggccgtatgggtaacaaa
gactttgaagtcgaccatgagatcacccgagcggacatgccaactattactggcgcagag
gactttgacggcgatattgagctcgtgggcagccaggtcgaggcagctccatttgttgag
gcgaagaaaccaagaaatgtcgtcgatgtggacaccttgcctgtgaaagtgccaaaagct
ccacagcctgtgcccgcacccgcaccaaagaagtctgttgcggcggcttcgttctatgcc
cccgtgcagcaagcgaggcccaagggtccttcgcatgatccagacgcaccgggagcggtc
gtcatgaaatcgccagatactgcgcatatagccaagtataacaaaaagaacgcgccagtt
gtcccagtggtcatcgaccccattatcgcccgcaagctgcgtccacaccagattgagggc
gtgaaattcatgtacgagtgcgtcatggctatgcagggacatgatggaaggggctgcatc
cttgccgacgagatgggtatgggcaaaacactgcaaacgatcacgcttgtgtggacactt
ctcaagcagaacccgtacgctggattgggtcctatcgtcggcaaagtcatgatcgtctgt
ccggtgacgctcatcaagaactggaagaatgagtttcacaagtggctgggacgagaccga
ctaggcatatttaccggagacaaggacaagtctactataaagcagtttgtaaattcacgg
atacatcatgtgctaatcataggctatgagcgactgcggacagtaatctcggagcttcag
tactgcattccgcctattggtcttatcatttgcgatgaaggtcatcgtctgaaatctgca
tcaaacaagacgtcaacgatgttcgaagtcctgactacgcctcgacgaatcatcctgtct
ggaacaccaatccagaacgacctgggagaattccacgctatggcggacttctgtaacccg
gacttactagggaactataacaactttaagaagttgtacgaagtgcctatactcaaaagc
cgtgctccagggtgctccaccaaagagagagaactgggtgaggctcgactcgagcaactg
ctggagaccgcaaagtccttcgtgctgcgtagggatgcgagcattctgaagaactacctt
ccacccaaacgtctccacgtagacgaatacgtggtctttataacacccactcagctacag
cgcgacatcttccgtcagatcctcacggccgacaagctcgacaatctcgtgcggaactcg
acggccgagtcacttgcgctcatcgggatgctcaccaaggtcagcaatagcccgatcctg
ctcaaagccgccgcggacaaggcgcgcgaacaggggcgcgacgcggagggcgagctcatc
aagaagaatgtgttcatggaggcagcaagactccttccagagagggcgcaggtcgacgat
gtgtctttgagtggaaagctcattgcactggcaaacctgttacgtgcattgtataaggga
accgacgaaaaatgtatcgtcgtttctcactatacctcgacgctcaacatcatcgaggcc
ttctgtaagaagaaacagtacacatacctgcgactcgacggttcaactgcagcgcagaag
agacaagactatgttaacgaattcaataaatcgctgcaaaggcaaagatttatattcctg
ttgagttccaaggctggaggtgtcggtctcaacctcatcggagcctcgaggctgtgcttg
atcgactctgactggaatccaagtcaatggctcggatacacagatggtacgtcgcgggct
gtcttgagatggcatggtgctaatgtgctcgctattgcagagaagatctaccaacgacaa
gtcacgaagcttggactcagtgactcatttctcggaaagggcggttctgaatcgaagtcg
gactctttcacgcgcaaggatctgagggacatcttcaccattcatccaaatacagcatgc
catacccacgacctgctagaatgcccatgtgaggacgactctggttcgatggcatctacg
aggatatcatcgaagggtcccactggtggctcaaattcggaggcagaagacgaagacgaa
gacgatagctctaatggaggcttcattcaggcgtctgctgttaagcccaagcatatcgag
aagctcgacaaagaatacttgcgccagaagaaagcccaactcgccgccctcggacagtgg
acgcacatcagctgtctgaggaggaatgctgtagagcgcatccaagactcgatcctccag
aagctggtcttcgtacccgagtccgatgagcgatctaaaaacagtggcggttccgcaccc
tcgcgcgtagcatcgcttttggaggccaccgaccttgaagccgtgctgcaagcaacgagg
ccgccgcttcctgtcgagtctctgcccggtggctcggcatcatttctgttcgagcgaacg
tctaagacggcgccgctggatgggaagatcttacctgaggaagacgagtag
DBGET
integrated database retrieval system
