Pseudomonas chlororaphis subsp. aurantiaca: JM49_00020
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Entry
JM49_00020 CDS
T03338
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcp03016
]
JM49_00020 (gidA)
03036 Chromosome and associated proteins [BR:
pcp03036
]
JM49_00020 (gidA)
Transfer RNA biogenesis [BR:
pcp03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
JM49_00020 (gidA)
Prokaryotic type
JM49_00020 (gidA)
Chromosome and associated proteins [BR:
pcp03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
JM49_00020 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
GIDA_C
FAD_oxidored
FAD_binding_2
Pyr_redox_2
AlaDh_PNT_C
HI0933_like
Pyr_redox
Thi4
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AIS10099
LinkDB
All DBs
Position
5081..6973
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AA seq
630 aa
AA seq
DB search
MDFPSRFEVIVIGGGHAGTEAALASARMGAKTLLLTHNVETLGAMSCNPAIGGIGKSHLV
KEIDALGGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRILYKAAVREILENQPNLWI
FQQAADDLIVEQDQVRGVVTQMGLRFFAESVVLTTGTFLGGLIHIGMQNYSGGRAGDPPS
IALAHRLRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPRQV
SCWITHTNARTHEIIASNLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFIEPE
GLTTHELYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETK
VIGGLFFAGQINGTTGYEEAGAQGLLAGVNAALRAQGKDSWCPRRDEAYIGVLVDDLITL
GTQEPYRMFTSRAEYRLILREDNADLRLTEKGRELGLVDDVRWAAFCKKREGIAQEEQRL
KSTWVRPGTEQGDAIAEKFGTPLTHEYNLLNLLSRPEIDYAGLVEVTGQGAEDPQVAEQV
EIKTKYAGYIDRQQDEIARLRASEDTKLPVDIDYSTISGLSKEIQSKLGATRPETLGQAS
RIPGVTPAAISLLMIHLKKRGAGRQLEQSA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
gtggatttcccttcccgttttgaagtgatcgtcatcggcggcggtcatgccggtaccgag
gcagcacttgcatcagcacgcatgggggcaaaaaccctgttgctgacgcacaacgtggaa
accctcggagcgatgagctgcaatcccgcgattggcgggatcggtaaaagtcatctggtc
aaagaaatcgatgccctcggcggcgcgatggccatggctaccgataaaggtggtattcag
tttcgggtgttgaacagccgcaaaggcccggccgtgcgtgctactcgtgcccaggccgac
cgcatcctgtacaaggccgctgtccgcgaaatcctggaaaaccagccgaacctgtggata
tttcaacaggcggcggatgacctgatcgtcgaacaggaccaggttcgcggcgtagtgacc
caaatgggcctgcgtttcttcgccgaatccgtggtgttgaccaccggtaccttcctcggt
ggacttatccacatcgggatgcagaactattccggcggtcgcgccggcgatccaccttcg
atcgccctggcccatcgcctgcgtgaattgccgctacgtgtcggccgcctgaaaaccggc
acgccgccgcgtatcgatggtcgttccgtggatttctcggtgatgaccgaacaaccgggc
gatacgccgattccggtgatgtcgttcctgggctcgaaagagcagcatccgcggcaggtc
agctgctggatcacccataccaatgcccgtacccacgagatcattgcttccaaccttgat
cgctcgccgatgtattccggggtgatcgagggaatcggcccgcgctactgcccgtcgatc
gaagacaagatccatcgctttgccgacaaggaaagccatcaggtcttcatcgagccggaa
ggcctgaccacccacgagctgtacccgaacgggatatccacatccttgccgttcgatgtg
cagttgcagatcgtgcaatcgatccgtggcatggaaaacgcccacatcgtgcgtcctggc
tacgccatcgagtacgactatttcgatccgcgtgacctgaagtacagcctggaaaccaag
gtgatcggcggtctgttcttcgccggccagatcaacggcaccaccggctacgaagaagcc
ggtgcccagggtttgctcgccggtgtcaacgccgcactgcgcgcgcagggcaaagacagc
tggtgcccacgtcgcgacgaggcctacatcggtgtgctggtcgacgacctgatcaccctc
gggacccaggaaccgtatcggatgttcacatcccgtgccgaataccgcctgatcctgcgc
gaagacaacgccgatctgcgcctgaccgaaaaaggtcgggaactgggtctggtcgacgat
gtccgttgggctgcgttctgcaagaagcgcgaaggcattgcccaggaagagcaacgtttg
aaaagcacctgggttcgcccgggcaccgaacagggcgatgcgatcgctgaaaagttcggc
acgccgctgacccatgagtacaacttgctgaatctgctgagccgtccggaaatcgactac
gctggtctggtcgaagtgaccgggcagggcgcagaagatccacaggttgccgaacaggtc
gagatcaagaccaagtacgccggctacatcgatcgccagcaggacgaaatcgctcgtctg
cgggccagcgaggacaccaagctgcctgtggatatcgactacagcaccatttccggcctc
tcgaaagagatccagagcaagctcggcgccacgcgtcctgaaaccctgggccaggcttcg
cggatcccgggcgttacaccggcagcgatttccctgttgatgattcacttgaaaaaacgc
ggcgcgggccgtcagttggagcaaagcgcttga
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