Pseudomonas chlororaphis subsp. aurantiaca: JM49_01275
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Entry
JM49_01275 CDS
T03338
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp00300
Lysine biosynthesis
pcp00470
D-Amino acid metabolism
pcp01100
Metabolic pathways
pcp01110
Biosynthesis of secondary metabolites
pcp01120
Microbial metabolism in diverse environments
pcp01230
Biosynthesis of amino acids
Module
pcp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JM49_01275
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JM49_01275
Enzymes [BR:
pcp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
JM49_01275
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AIS10344
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Position
complement(278962..279792)
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRNTGVGFDQLLIVEAPSNPDVDF
RYRIFNADGSEVEQCGNGARCFARFVLDKRLTTKRQIRVETKSGIIELDVRNDGQISVDM
GAPRLVPEQIPFVAPAQALSYQVEVDGQTVELAAVSMGNPHAVLRVNDINSAPVHELGPK
IEHHPRFPARVNVGFIQVIDRQRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVKMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcacggcctgggtaatgatttcatggtcctcgacctg
gtcagccagcacgcgcacatcctgcccaaacatgccaagcaatggggcgatcgcaacacc
ggtgtcggtttcgaccagttgctgatcgtcgaggcgccaagcaacccggacgtggacttc
cgctaccggatcttcaatgccgacggctccgaagtggagcaatgcggtaacggtgcgcgc
tgtttcgcccgtttcgtgctggacaagcgtctgaccaccaagcgccagatccgcgtcgag
accaagagcggcatcatcgaactggatgtgcgcaacgacggtcagatcagcgtcgacatg
ggcgcgccgcgcctggtgcccgagcagattccgttcgtggcgccggcccaggccttgagt
taccaggtcgaagtcgacggccagaccgtcgagctggccgccgtgtccatgggcaacccc
catgccgtgctgcgggtcaacgacatcaacagcgcgccggtgcatgagctgggaccgaag
atcgaacatcacccgcgcttcccggcccgggtcaatgtcggcttcatccaggtcatcgac
cgtcagcgcgcgcagttgcgggtctgggaacgtggcgccggggaaacccaggcctgcggt
accggcgcctgcgccgccgcagtggccgcgatcagccaggggtggatggattcgccgcta
ttgatcgacctgccgggcgggcgcctgtccatcgagtgggcaggccctggccaaccggtg
aagatgaccggcccggcagtgcgcgtatacgaaggacaggtgcgtctttga
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