Pseudomonas chlororaphis subsp. aurantiaca: JM49_18875
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Entry
JM49_18875 CDS
T03338
Name
(GenBank) LysR family transcriptional regulator
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
ExbD
HTH_IclR
SBP_bac_11
MarR_2
Sec8_N
Motif
Other DBs
NCBI-ProteinID:
AIS13639
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Position
complement(4146279..4147205)
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AA seq
308 aa
AA seq
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MDRFDAMQAFARVVEAGSFTKAADTLHMSKTSVTQLVQQLEARLRVKLLNRTTRRVHLTA
DGAVYYERVVRLLADLDDAETSLSSASALPRGRLRVDVPSPLASMILVPALPGFHARYPD
IQIDLGVSDRIVDVLGENVDCVVRGGELMDQSLMARRIGDLQLGVYAAPSYLERLGTPAH
PRELEDSLHRIVGFLWARTGKALPYAMRNHNESLQIKGRYVLAVDDGNAYLAAGLAGLGV
LWLPDYMARAHQERGELVRLFEDWQLDPMPIYVAFPPNRHISIKLRVFIDWVAELMARHA
PVASRVGV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggaccgatttgatgcgatgcaggcctttgcccgggtggtggaggcgggcagcttcacc
aaggccgccgacacgctgcacatgagcaagaccagcgtgacgcaactggtgcaacaactg
gaggcacgcttgcgggtcaagttgctcaaccgcaccacgcgccgggtccacctgacggcc
gacggcgcggtgtattacgaacgcgtggtgcgtctgctggccgacctcgacgatgccgag
accagcctgtccagcgcctcggcgctacccagggggcgcttgcgggtggatgtgcccagc
ccgctggcgagcatgatcctggtgccggcgctgcccgggttccacgcccgctacccggac
atccagatcgacctgggcgtcagcgaccgcatcgtcgatgtgctcggcgagaatgtggat
tgcgtggtgcgcggtggcgagctgatggaccagtcgctgatggcgcggcggatcggcgat
ctccagctgggcgtgtatgcggcgcccagctacctggagcgtctcggcacccccgcgcat
ccgcgcgagctggaggattccttgcatcgtatcgtcggttttctctgggcgcgcaccggc
aaggccttgccctatgccatgcgcaaccacaacgaaagtctgcagatcaagggccgctac
gtgctggcggtcgacgatggcaatgcctacctcgccgccgggctggcgggcctgggcgtg
ctctggctgccggactacatggccagggcgcaccaggaacggggcgaactggtgcgtctg
ttcgaggattggcagctcgatccgatgccgatctacgtggcgttcccgcccaaccggcat
atcagcatcaagctgcgggtgtttatcgactgggtcgccgagctgatggcccggcacgcg
ccggtcgccagccgagtgggggtgtga
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