Pseudomonas chlororaphis subsp. aurantiaca: JM49_21060
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Entry
JM49_21060 CDS
T03338
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp00071
Fatty acid degradation
pcp00280
Valine, leucine and isoleucine degradation
pcp00310
Lysine degradation
pcp00362
Benzoate degradation
pcp00380
Tryptophan metabolism
pcp00410
beta-Alanine metabolism
pcp00640
Propanoate metabolism
pcp00650
Butanoate metabolism
pcp00907
Pinene, camphor and geraniol degradation
pcp00930
Caprolactam degradation
pcp01100
Metabolic pathways
pcp01110
Biosynthesis of secondary metabolites
pcp01120
Microbial metabolism in diverse environments
pcp01200
Carbon metabolism
pcp01212
Fatty acid metabolism
Module
pcp_M00087
beta-Oxidation
pcp_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
JM49_21060
00650 Butanoate metabolism
JM49_21060
09103 Lipid metabolism
00071 Fatty acid degradation
JM49_21060
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
JM49_21060
00310 Lysine degradation
JM49_21060
00380 Tryptophan metabolism
JM49_21060
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
JM49_21060
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
JM49_21060
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
JM49_21060
00930 Caprolactam degradation
JM49_21060
Enzymes [BR:
pcp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
JM49_21060
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
JM49_21060
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
JM49_21060
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
UDPG_MGDP_dh_N
DAO
DUF1731
Motif
Other DBs
NCBI-ProteinID:
AIS14049
LinkDB
All DBs
Position
complement(4616309..4618453)
Genome browser
AA seq
714 aa
AA seq
DB search
MTEAIRYEKGQDQIVVLTIDMPGQSANTMNAVYREAMAACVARLQAEQESIAGVIVTSAK
KTFFAGGDLNELIKVGKAEAQAFYDMVLTLKGQLRALETLGKPAVAAINGAALGGGWEIC
LACHHRVALDDPSLQIGLPEVTLGLLPGGGGVVRMVRLLGLEKALPYLLEGKKVRPQQAL
QAGLIDQLASDRDDLLAKARAWIVANPAVKQRWDVAGYQIPGGTPSHPKVAQMLAIAPSI
LRSKTQGCLPAPEKILCAAVEGAQVDFDTAQLIEARYFTELTTGQVAKNMIGTFWFQLNE
INAGGSRPQGFAPYVTRKVGVLGAGMMGAGIAYVSAVAGIEVVLKDINLAAAEKGKAHSA
ALLEKKVARGHLSAAQRDATLARIRTTEQDADLAGCDLIIEAVFEDRELKARVSAAAQQV
VGAQAVIASNTSTLPISGLAKAVPDQGKFIGLHFFSPVEKMPLVEIIKGEQTSDETLARG
FDFVQQIKKTPIVVNDSRGFFTSRVFGTFTNEGIAMLGEGVAAPMIETEARKAGMPIGPL
AICDEVSLSLLSHIRQQTAKDLQAEGKPLLEHPAFAVIDLLLNEYKRPGKAAGGGFYDYP
AGEQKHLWPQLKTRFEKADGQISPQDVRDRLLFVQAIETVRCVEEGVLRSTADANIGSIF
GIGFAAWTGGALQFINQYGLKDFIARAQYLAEQYGERFAPPALLLEKAAKGQLF
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagccatccgttacgaaaagggccaggaccagatcgtcgttctgaccatcgac
atgccgggccagagcgccaacaccatgaacgcggtgtaccgcgaggccatggccgcctgc
gtggcccgcttgcaagccgagcaggaatcgattgccggggtgatcgtcacttcggcgaaa
aagaccttcttcgccggcggcgacctcaatgaattgatcaaggtcggcaaggccgaagcc
caggccttctatgacatggtgctgaccctcaagggccagctgcgggccctggagaccctg
ggcaaacccgcggtagcggcgatcaacggcgcagccctgggcggtggctgggagatctgc
ctggcctgccatcaccgggtggcgctggacgacccatcgctacagatcggcctgccggaa
gtgaccctcggcctgctgccgggcggcggcggggtggtgcgcatggtgcgtttgctgggg
ctggaaaaagccctgccgtatctgctggaaggcaagaaggtgcgaccgcagcaggcgctg
caagcgggcctgatcgaccaactggccagcgaccgcgacgacctgctggccaaggccagg
gcgtggattgtcgccaacccggcggtcaagcagcgctgggacgtggccggctaccagatt
cccgggggcacgccgtcgcacccgaaagtcgcgcagatgctggccatcgcaccgtcgatc
ctgcgcagcaagacccagggctgcctgccggcgccggagaaaatcctctgtgcggcagtg
gagggcgcccaggtcgatttcgataccgcgcagttgatcgaagcccgttatttcaccgag
ctgaccaccggccaggtggcgaaaaacatgatcggcaccttctggttccagctcaacgag
atcaatgccggtggctcccgtccccaaggttttgcgccctatgtgacccggaaggtcggg
gtgctcggtgccgggatgatgggcgccgggatcgcttacgtcagcgccgtggctggcatc
gaagtggtgctcaaggacatcaacctggcggcggccgagaagggcaaggcccattcggcg
gcgctgctggagaagaaggttgcccgcggccacttgagcgccgcgcagcgtgacgccacg
ctggcgcgaatccgcaccaccgagcaggacgctgacctggccggttgcgacctgatcatc
gaggcggtgttcgaggatcgcgaactcaaggccagggtctcggcggcggcgcagcaggtg
gtgggggcgcaggcggtgatcgcgtccaacacctcgactctgccgatcagcggcctggcc
aaggcggtgcctgatcaaggcaagttcatcggcctgcacttcttcagtccggtggaaaaa
atgcccctggtggaaatcatcaagggcgagcagaccagcgacgaaaccctggcgcgcggt
ttcgacttcgtccagcagatcaagaagaccccgatcgtggtcaacgacagccgcggcttt
ttcacttcgcgggtgttcggcaccttcaccaacgaaggcatcgccatgctcggcgagggc
gtggccgcgccgatgatcgagaccgaggcgcgcaaggcggggatgccgatcggtccactg
gcgatctgcgacgaggtttccctgagcctgctgagccatatccgccaacagactgccaag
gatctgcaggccgagggcaagccgctgctggagcatccggcctttgccgtgatcgacctg
ctgctcaatgaatacaagcgcccaggcaaggccgcgggcggcggtttctacgactacccg
gccggggagcagaaacacttgtggccgcagctgaaaacccgcttcgagaaagccgacggg
cagatttcgccgcaggatgtgcgcgatcggctgttgttcgtgcaggccatcgaaaccgtg
cgttgtgtggaggagggcgtattgcgctcaacggccgatgccaatatcggctcgatcttc
ggtatcggctttgcggcctggaccggcggggccttgcagttcatcaaccagtacggtctg
aaggactttatcgcccgtgcccagtacctggccgagcaatatggcgagcgtttcgcgccg
ccggcgctgctgttggagaaggccgccaagggccagttgttctga
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