Pectobacterium carotovorum subsp. carotovorum PC1: PC1_0102
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Entry
PC1_0102 CDS
T00934
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pct03021
]
PC1_0102
Transcription machinery [BR:
pct03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PC1_0102
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
ACT11164
UniProt:
C6DGS7
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Position
125319..126176
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AA seq
285 aa
AA seq
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MTKDMQTFTLVPQGSLEGYIRAANAYPMLTAEEERALAERLHYQGDLDAAKHLILSHLRF
VIHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKTRLGWFNQDEVELVARELGVTSKDVREMESRMAAQDM
TFDPTPEEDSHDGKAMSPMLYLQDKSSDFADGIEEDNWDTHAADKLTYALEGLDERSQHI
IRARWLDDDNKSTLQELADQYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagatatgcaaactttcaccttagttccccagggcagtctggaagggtatatt
cgtgccgccaatgcctatccgatgctgacggcggaggaagagcgggcgctggctgaacgg
ctgcattatcagggcgatctggatgcggctaagcacctgattctgtcacacctgcgtttt
gttattcacgttgcccgtaactattccggctacggcctgccgcaggcggacctgattcag
gaagggaacatcggcctgatgaaggcggtacgtcgctttaaccctgaagtgggcgtgcgt
ctggtttctttcgccgtgcactggatcaaagcagaaattcatgaatacgtgctgcgtaac
tggcgtatcgtgaaagtcgcgaccaccaaagcacagcgtaaactgttctttaacctgcgg
aagacgaaaacgcgtctcggttggtttaaccaagatgaagtcgaactggtggcacgtgaa
ctgggtgtgaccagcaaagacgtgcgcgagatggaatcccgtatggcggcgcaggacatg
acgttcgatccaacgccggaagaagattcgcacgacggtaaggcgatgtcgccgatgctt
tacctacaagataaatcgtctgactttgccgacggcattgaagaagataactgggacacg
catgcggcggataagctcacttacgcgctggaagggctggatgaacgcagccagcatatt
atccgtgcccgttggctggatgatgacaacaaatccaccttgcaggaactggccgatcaa
tacggcgtttccgcagagcgtgttcgtcagttagaaaagaatgcgatgaaaaaactgcga
gcggcgatagaagcgtaa
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