Pectobacterium odoriferum: BCS7_15975
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Entry
BCS7_15975 CDS
T03424
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridylate synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pcv
Pectobacterium odoriferum
Brite
KEGG Orthology (KO) [BR:
pcv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcv03009
]
BCS7_15975 (rluD)
Enzymes [BR:
pcv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
BCS7_15975 (rluD)
Ribosome biogenesis [BR:
pcv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BCS7_15975 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
TruB_N
Motif
Other DBs
NCBI-ProteinID:
AIU89410
UniProt:
A0A094SNM2
LinkDB
All DBs
Position
complement(3619323..3620300)
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AA seq
325 aa
AA seq
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MAQQVQLTATVAESQLGQRLDQALAELFPDYSRSRIKEWILENRVQINGNVTNKPKEKVL
GGESVAIDALIEEEARWEAQDIKLDIVYEDEDILVINKPRDLVVHPGAGNPDGTVLNALL
HHYPEIVDVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVEALQAREITREYEAVAIGSMT
AGGMVEQPIARHATKRTHMAVHPMGKPAVTHYRIMEHFRAHTRLRLRLETGRTHQIRVHM
AHINHPLVGDQLYGGRPRPPKGASEDFIETLRGFDRQALHATMLRFYHPITGIHMEWHAE
LPQDMVDLINALKADTEAFKDQLDW
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacaagtacaactcaccgcaacggtggccgaatctcaactcggacaacgttta
gatcaggctttggccgaattgttccctgattattcacgatcccgcataaaagagtggatt
cttgagaatcgagtacagattaacggcaatgtcaccaataagccaaaagagaaagtactt
ggcggcgaatcggtagcgattgatgcattgattgaagaagaagcacgctgggaagcacag
gatatcaagctggatatcgtgtacgaagatgaggatatcctggtcatcaataaacccaga
gatttggtggttcaccccggtgcgggtaacccagatggcacggtattgaatgccttgtta
catcattatcccgagattgtcgacgtgccccgtgccgggattgtgcaccggcttgataaa
gatacgactgggctcatggtggtcgcgaaaaccgtaccagcacagacgcgtttagttgag
gcgttacaggcgcgtgaaattacgcgtgaatatgaagctgttgcgattggttcaatgact
gcaggtggtatggtcgaacagcctatcgctcgccacgcaaccaagcgtactcatatggcc
gtgcacccaatgggtaagcctgccgtgacgcattatcgcatcatggaacatttccgtgcg
catacccgtttgcggttgcgtctggaaacggggcgcacccatcagattcgcgtgcacatg
gcgcacattaatcatcctctggttggcgatcagctatacggtggtcgtcctcgcccgcca
aaaggcgcgtcggaggatttcattgagacgctgcgtgggttcgatcgtcaggcgctgcat
gccaccatgttgcgtttctaccatcctattactggcattcacatggaatggcatgcggaa
ttgccacaggatatggtcgatctgattaatgcactgaaagcggataccgaagcgtttaag
gatcagctcgactggtaa
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