KEGG   Phoenix dactylifera (date palm): 103701483Help
Entry
103701483         CDS       T03274                                 

Definition
(RefSeq) DNA ligase 4
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
pda  Phoenix dactylifera (date palm)
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pda00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    103701483
Enzymes [BR:pda01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     103701483
DNA repair and recombination proteins [BR:pda03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     103701483
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
Un
AA seq 1169 aa AA seqDB search
MTDETVRFGVLCSMFEAMVRDRSAAKKRKRFRTLLDRVYTGRDYFSAVRLILPALDRERC
SYGLKESALAAALVDALGLAKDSPDALRLVNWRKGGARSGANAGNFALVAAEVLQRRQGM
ASGGLTIKELNDALDQLASKENSQTSFNREGKTAVLSGLIKKTNALEMKWILMIILKDLK
LGISEKSIFHEFHADAEDLFNVTCDLKLVCEKLKDRSQRHKRQDIEVGKAVRPQLALRVT
DAATAWRKLHGKHVVVECKFDGDRIQIHKNGEEIHFFSRNFLDHPEYKHGMLNVILRNIT
VERCILDGEMLVWDTSTQRFAEFGSNQEIAKAAREGLESDRQLCYVAFDILYVGDTSVIH
QSLTERHDLLRKVVKPLKGRLEILTPNGGLNDRRLQGEPCWSIVAYTVEDVERFFKETIE
NRDEGIVLKDLGSKWEPGDRSGKWLKLKPDYIHAGADLDVLIIGGYFGSGRRGGEVAQFL
VGLAVRSDSTSCPKRFVSFCRVGTGLSDEELDTLITKLKPYFRKNEYPKKVPPFYEVTNN
SKERPDVWIDSPDKSVILSITSDIRTIKSEVFAAPYSLRFPRIHRVRYDKPWHECLDVQS
FVDLVHSSNGNTQRGTDHGGLQNHGSKHVKSTKKGEKKNVSIVPAHLIHTDISGVKEETL
IFANMMFYFINVPPSSSVDYFHKIVVENGGTFSMNLNDSVTHCIAAERKGIKYQAAMRHR
DIIHYSWVLDCCKQKRLLLFHPKYYLFLADSSKRKFQEEIDTFSDYYYCDIDIADIKQVF
SNMHGPEYANNIDYYKKKYCPVEALCLFQGCCVYFYKSMSVINTCDEVISELALRRMRLE
ITMHGGEVCSGLQCATHLIVCSTTKEANNFDEIYKSFPSSQRHLLHDRRLHVVMHQWLED
SLETGKKLHEDSYNLKPDTLEEIKIDESRHNLVSPVTTINTEKQSVSRLIIGEKRKRDRP
THADTRKGRTGPRHKRTMRARIGNRLAKIDADEAENSDSSDETSMGKTLKSREESEIDIT
ESVGVKNQESFSDGSCQREALGSRKESQGDMEESEDIKYQAPHFSIQVAEYHQGSQIVTP
EDRTNERFDNVQTLNVTETGNKGTGEKLEQMVDPLRAILLDMIPSLSQNNVETGSSIPDG
KKAQPDPHTNPVKKKVSYKDVAGQLLKDG
NT seq 3510 nt NT seq  +upstreamnt  +downstreamnt
atgacagatgagacggtgagattcggcgttctgtgcagtatgttcgaggcgatggtgagg
gatcggtcggcggcgaagaaacggaagcggttcaggacgctgctggaccgggtgtacacg
gggcgggactactttagcgccgtccggctcatcctcccagccctcgaccgggagcggtgc
tcgtacgggctcaaggagtccgccctcgccgccgccctcgtcgacgccctcggcctggcc
aaggactctcccgacgccctccgcctcgtcaactggcgcaagggcggcgcccgctcgggt
gccaacgccggcaacttcgcccttgtcgccgccgaggttctacaacgtaggcaaggaatg
gcttctggtgggcttacaatcaaggagttgaatgatgctcttgatcaactagcctcaaaa
gaaaatagtcaaacatcctttaacagggaagggaagactgctgttctttctggtctcatt
aagaaaacaaatgccctggaaatgaagtggattctaatgatcattcttaaagatctgaag
ctggggattagtgagaagagtatatttcatgagtttcacgcagatgctgaagatttgttc
aatgtcacttgtgacctaaaactagtctgtgaaaaactgaaagatcgaagtcaacgacat
aaacggcaggatatagaagtgggaaaagctgtaaggcctcagctagctctgagggtcact
gatgctgcaactgcatggaggaagcttcacggaaagcatgtggttgtcgagtgcaagttt
gatggtgatcgcattcaaatccacaagaatggagaagaaattcactttttttcacggaat
tttctcgatcatcctgagtacaaacatggcatgttgaatgttattttacggaacatcact
gttgagaggtgtattctggatggtgaaatgcttgtttgggacacgtcgactcaacgtttt
gcagaatttggttcaaatcaagaaatagcaaaggcagctagagaaggattagagagtgac
cgccagctgtgctatgttgcttttgatattctttatgttggagacactagtgttattcat
cagagcttgacagaaagacatgacctcctgcgaaaagttgtaaaacctttaaagggtcgc
ttagaaattctgacccctaatgggggtcttaatgatcgtcgtttgcaaggcgaaccatgt
tggtccattgttgcttatactgtggaagatgtggagagatttttcaaagaaactattgag
aacagagatgagggaattgtgttgaaggaccttggttccaaatgggaacctggtgatcga
agtggaaagtggttgaagttgaaacctgattacatacatgctggtgctgatctggatgtg
cttattataggaggatattttggttctggccgtcgtggaggagaggtagctcagtttttg
gtgggtcttgcggtgcgttcagattctactagctgtccaaaacgatttgtttcattctgt
cgagttggtactggtctctctgacgaggagcttgatactctcattaccaaattgaagccc
tatttcaggaagaatgaatatccaaaaaaagtgccacccttttatgaagtaacaaataat
tcaaaggagaggccagatgtttggattgacagccctgacaaatcggtcatactttcaata
actagcgatatccgaacaataaagtctgaggtatttgctgcgccatacagtttgagattt
ccacgtattcatcgagtgagatatgacaagccatggcatgagtgccttgatgttcagtca
ttcgtggacttggtacattcaagcaatggcaatacacagaggggaacagatcatggaggt
ctacaaaatcatggatcaaaacatgtaaagtccacaaagaagggagagaagaaaaatgtt
tccattgtccctgctcatttgatccataccgacatctctggtgttaaggaggagacactt
atatttgcaaatatgatgttttattttatcaatgttcctccatcctcttctgtagactac
tttcataaaattgtggttgagaatgggggaactttctcaatgaatctcaatgactcggtt
actcactgcattgcagctgagagaaaagggatcaagtatcaagccgctatgcgccacaga
gatatcattcactattcttgggtcttggattgttgcaaacaaaagcgtcttctacttttc
catcctaagtactacttatttcttgcagattcttcgaagagaaagtttcaagaggagatc
gacacattctctgattattattactgcgatatagatattgcagacattaaacaggtattc
agcaatatgcatggaccagaatatgcaaacaacatagattattataaaaagaagtactgt
ccggtggaagcattgtgcttgtttcagggttgttgtgtttacttctacaaatcaatgtct
gttataaatacctgtgacgaagtaatatcagagcttgctttaaggaggatgaggcttgaa
ataaccatgcacggtggtgaagtttgcagcggtcttcaatgtgctactcatctgatagtg
tgttcaacaacgaaagaagccaacaactttgatgaaatatataaaagttttccatcttct
caaagacacctactacatgacagaaggctacatgttgtgatgcatcagtggttggaagat
tcattagaaacaggcaagaagttgcatgaagattcttataacttgaagcctgatacttta
gaagaaattaagattgatgagagcaggcacaatctcgtatctcctgtaaccacaattaat
acagaaaaacagagtgtctctagactaattataggtgaaaagaggaaaagagataggccc
acgcatgctgatacaagaaagggtagaacaggtccaagacacaaacggacaatgcgggca
aggattggaaatagacttgcaaaaatagatgcagacgaagcagagaacagtgattcctca
gatgaaacttctatggggaaaaccctgaagtcaagggaagagtctgagattgacatcaca
gaaagtgtgggtgtcaaaaatcaagaatcattttcagatggaagttgtcaaagagaagcc
ttaggatcaaggaaagagtctcaaggtgacatggaggaaagtgaggatatcaaatatcaa
gcaccacattttagtattcaagtagctgagtatcatcaagggtctcagattgtaactcca
gaagatagaaccaatgaaaggtttgacaatgtgcaaactttgaatgttacagaaacaggg
aataaaggaactggtgaaaaattggaacaaatggttgatccactgcgtgcaatattattg
gatatgataccaagtcttagccagaataatgtggaaactggaagctccattcctgacggc
aagaaagcacagccagacccccacaccaacccagtgaagaagaaagttagctacaaagac
gttgcaggtcaactcctcaaagatgggtaa

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