Phoenix dactylifera (date palm): 103706553
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Entry
103706553 CDS
T03274
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6-like
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03015
mRNA surveillance pathway
pda03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103706553
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103706553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103706553
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
103706553
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
103706553
NCBI-ProteinID:
XP_008788908
UniProt:
A0A8B9AXQ4
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Position
1:complement(32716619..32728092)
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AA seq
608 aa
AA seq
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MEPGGQGFAGGVGDRDGFHRNEAISAVQDEEQFYGEDDYDDLYNDVNVGEGLLHSVHRSD
EPRGYPREEGNRSNPAPAPAPALPPAPLPPSGNAPEKVQIPGIAGDPKIERPVDGSGGFH
EQGFRGGGELAVAARPTAPPPAGSRPELGQSSGRPGGIQGQTGSSGYGNEGYRRPGSGFG
GDARQGGGGGLAAGGGGVNGGGEGAGGTTLFVGELHWWTTDADLEAELSKYGQVKEVKFF
DEKASGKSKGYCQADFYDPMAAAACKEGMNGHVFNGKPCVVAFASPSTVRRMGDAQVKNQ
QMTAQSSALAQKGRGGGGAPSGGNWGRGGGGGNWGRGGMGNRGPMGNMRNRMGPVGGRGI
MGNGGMVAPPPPVLHPGAMLGQGFDPTGYGAAMGRIGGAYGGFPAGPTASPFPGLMPSFP
PVVAPHVNPAFFGRGGMAAGGVGMWPDPSMGGWGGEEQSSYGDDAASDQQYGEGSHGKDR
GPDRDWSGASDRRHDREKDMGPGQEWSERRHRDEREMGRERDRDWERDRERERERERERD
RDRERERERERERERDRYRDDRDRHGDHYRHRDRELEHDDNWDRGRSSRQRSRSREVEHS
KRRHLSSE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggagcccggcgggcagggcttcgccggaggcgtcggagaccgcgacgggttccaccgc
aacgaggcgatctccgctgttcaggacgaggagcagttctacggggaggacgactacgac
gacctgtacaacgacgtcaacgtcggggagggcctcctccactccgtccaccggagcgac
gagcccagggggtatccgagggaggagggcaacaggagcaacccggcgccggcgccggcg
ccggccctcccgcccgcgccgctcccgccgtccgggaatgcgccagagaaggtccagatc
cccggaatcgctggcgacccgaagatcgagagaccagtggatggatccggtggttttcat
gagcaagggttcaggggaggcggggaattggcggtggcggcacggcccacggcgccaccc
ccggctggaagtaggcccgagttagggcagtcttctggtcgacccggcgggatccagggg
caaacggggagctctggatatgggaacgagggttatcgaaggccagggagtggctttgga
ggtgacgcgaggcagggaggaggcggaggactggcagcgggaggagggggcgttaatgga
ggaggagaaggagctggggggactactctcttcgtgggggagcttcactggtggacgacg
gacgctgatctcgaggcagagctcagcaagtacgggcaggtgaaggaggtgaagttcttc
gatgagaaggcgagtgggaagtcgaaggggtactgccaggctgatttctatgatccaatg
gctgctgcagcatgcaaggaagggatgaatgggcatgtgttcaacggcaagccctgtgtt
gtggcatttgcatcgccgagcactgttcgtcggatgggcgacgctcaagtaaagaatcag
cagatgacagcccagtcgtcagcactagctcagaagggcagaggagggggaggagcccca
tctggtggtaattgggggagggggggtggtggtggtaattgggggaggggtggaatggga
aaccgaggaccgatggggaatatgaggaacaggatggggccggtaggcggcagaggaatt
atgggaaatggcgggatggtcgctccacctcctccagtgctacaccctggtgccatgctt
ggtcaaggtttcgatccaactggttatggagcagccatggggagaatcggtggcgcatat
ggagggtttcctgcaggaccaacggcatctccattcccaggattgatgccttcatttcct
ccagttgtggctcctcatgtgaacccagccttcttcggaaggggagggatggctgctggt
ggggttgggatgtggccggatcccagcatgggtggatggggaggtgaagaacagtcaagt
tatggggatgatgctgcttcagaccagcagtatggagaaggaagccatgggaaggatagg
ggtcctgatcgggattggtcgggggcttcagatagaaggcatgacagggagaaggatatg
ggtcctgggcaggagtggtcagaaaggaggcatcgtgatgaaagagaaatgggtagggag
agagatcgtgactgggagagagacagggagagggagagggagagagaaagggagagggac
agggatagagagagggaaagggagagggaaagagagagggagagggataggtatcgggat
gacagagaccgtcatggggatcactacaggcacagggaccgtgaattggagcatgatgat
aactgggatagaggacgatcatcaaggcaaagaagcaggtcacgggaggtggagcattca
aagaggcggcatttgtcatctgagtaa
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