KEGG   Paracoccus denitrificans: Pden_0142
Entry
Pden_0142         CDS       T00440                                 
Name
(GenBank) TRAG family protein
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
pde  Paracoccus denitrificans
Pathway
pde03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pde00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Pden_0142
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pde02044]
    Pden_0142
Enzymes [BR:pde01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Pden_0142
Secretion system [BR:pde02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   Pden_0142
SSDB
Motif
Pfam: T4SS-DNA_transf TrwB_AAD_bind TraG-D_C
Other DBs
NCBI-ProteinID: ABL68259
UniProt: A1AYB5
LinkDB
Position
1:127107..129131
AA seq 674 aa
MSGTKILWGQITVVFLIVLIFVWSGTQWTAWRLGFQPQLGPAWFALWGIPVYYPPALFWW
WYFYDAYAPRIFVEGGIIAAAGGFLAIGTAIILSVMRAREAADVETYGSARWAERPEIER
AGLLGPDGVVLGKLGADYLRHDGPEHVLCFAPTRSGKGVGLVVPTLLTWPGSAIVHDIKG
ENWQLTAGFRARHGRVLLFDPTNAQSAAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLE
KRNHWEKTSHALLVGVILHVLYAEEDKTLARVAAFLSDPRRSIEATLAAMMKTPHLGEAG
PHPVIASAARELLNKAENERSGVLSTAMSFLGLYRDPVVAQVTSRCDWRIADLIAGEQPS
TLYLVVPPSDISRTKPLIRLVLNQIGRRLTEDLRGKDDRHRLLLMLDEFPALGRLDFFES
ALAFMAGYGIKSFLIAQSLNQIEKAYGPNNSILDNCHVRVSFAANDERTAKRVSDALGTA
TEMKAMKNYAGHRLAPWLGHIMVSRSETARPLLTPGEVMQLPPEDEIVMVAGTPPIRARK
ARYYVDPRFRERVLAPPDTREVMPSRQMDDWTGLPPPKLDDVGQGAGAAAVPNAALAQVD
TNSSGDSDNAGLRREPGLEPYQDIAPQPVTLPENEFDPDFEAPEQQAVRNRGLARDMRRV
ARQISMNQDDGLEL
NT seq 2025 nt   +upstreamnt  +downstreamnt
ttgtccggcacgaagatcctctggggccagatcaccgtggtcttcctgatcgtgctgatc
ttcgtctggtccggcacgcaatggacggcctggcggcttggcttccagccgcagctcggc
ccggcctggttcgctctctggggcattccggtctattacccgccggccctgttctggtgg
tggtacttctacgatgcctatgcgccacgcatcttcgtcgagggcggcatcatcgctgcc
gcgggcggattcctcgccatcggcaccgccatcatcctctcggtgatgcgcgcccgtgag
gctgccgatgtcgagacctacggctcggcgcgctgggcggagcggcccgagatcgagcgg
gccggactgctcggccccgatggcgtggtgctcggcaagctcggcgcggactatctgcgc
cacgacggcccggaacatgtgctctgcttcgcaccgacccgatccggtaaaggcgtcggg
ctggtggtgccgacgctgctgacctggcccggctcggccatcgtccatgacatcaagggt
gagaactggcagctcaccgccgggttcagggcacggcacggccgggtgctgctcttcgat
ccgaccaatgcccaatccgccgcctacaacccgttgctggaggtgcgccgcggggaatgg
gaggtgcgcgatgtccagaacatcgccgatatcctcgttgatcccgagggctcgctggaa
aagcgcaaccattgggaaaagaccagccatgcccttttggttggcgtgatcctgcatgtg
ctctatgccgaggaggataagaccctcgcgcgcgtcgccgccttcctctccgatccgcgc
cggtcgatcgaggcgacgctggcggcgatgatgaagaccccgcatctcggagaggccggc
ccgcatccggtcatcgccagcgccgcgcgcgagttgctgaacaaggccgagaacgaacgc
tcgggcgtgttgtccaccgccatgtccttcctcgggctttaccgcgatccggtggtggcc
caagtcaccagccgctgcgactggcgcatcgccgatctgatcgcgggcgagcagccttcg
acgctttatctggtggtgccgccttccgacatctcgcgcaccaagccgctgatccggctg
gtgctgaaccagatcggccggcgcctgaccgaggatctgcgcggcaaggacgaccggcac
cgcctgctgctgatgctggacgagttcccggcgctgggacgactggatttcttcgaatcc
gccctggccttcatggccggctacggcatcaagtccttcctgatcgcgcaatcgctcaac
cagatcgagaaggcctatggcccgaacaattcgatcctcgacaactgccatgtccgggtc
agcttcgccgccaacgacgagaggacggccaaacgggtctccgatgccctcggcaccgcc
accgagatgaaggcgatgaagaactatgccgggcaccgcctggcgccctggctcggccat
atcatggtctcgcgctccgagaccgcccggccgctgctcacccccggcgaggtgatgcag
ctgccgcccgaggacgagatcgtcatggtggcgggcaccccgccgatccgggcccggaag
gcgcgctactatgtcgatccgcgtttccgcgagcgggtgctggccccgcccgatacgcgc
gaggtcatgccttcacggcagatggatgactggaccgggctgccgccgccaaagctggat
gatgtggggcagggggctggtgctgccgccgtgccgaatgccgcgcttgcccaggtcgac
accaattcatccggggattcggacaatgccggtctgcgccgagagccaggactggagccc
tatcaggatatcgcgccgcagccggtgacgcttccggagaacgagttcgatcccgatttc
gaggcccccgagcagcaggcggtccgtaaccggggactggcgcgcgacatgcgtcgggtc
gcgcgccagatctcgatgaaccaggacgacggattggagctctga

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