Paracoccus denitrificans: Pden_0705
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Entry
Pden_0705 CDS
T00440
Name
(GenBank) Lytic transglycosylase, catalytic
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pde
Paracoccus denitrificans
Brite
KEGG Orthology (KO) [BR:
pde00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pde01011
]
Pden_0705
Enzymes [BR:
pde01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Pden_0705
Peptidoglycan biosynthesis and degradation proteins [BR:
pde01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Pden_0705
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Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_2
SLT_4
Motif
Other DBs
NCBI-ProteinID:
ABL68817
UniProt:
A1AZX3
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All DBs
Position
1:685120..687270
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AA seq
716 aa
AA seq
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MYPFRDRLLAPLLALALSLAQPAGAEDAGHLSRALAAAAMRDWATATAEADASGPIARDL
IQWQRLRAGLGSWPEYRDFAARNRDWPGMALFWKRGDAVLRADLPPAEVIEWFGPRRPDT
LNGAMALIAALQATDPPAAKAEIARFWTEQALTKPEADAFLAAHGTEVAGLHDARLMRLL
DLGEWQAAQVVLPMASAPAQALGRARLALQSGQAGVDTLILALPDAQRGDAGLALDRFRW
RVWAKMPELARELMLERSTSAEALRDPAAWAGKRADYARLALRQGDWALAERLAAGHFLP
PGSDAYSDLEWLAGYGALRGGAADRALGHFQTLERAVASPISLSRAHYWQGRALEAKGDG
PGADAAYARAAGYQSAWYGQLAAERLGLPMLPDLAVAGRSEASLPDWRGSLLRTNPVWQA
GTWLVAAGEPDQGARFFLHLAETAAPEDIGRMARMMLEMRLPWHALRLAKAAAAKGAVYP
AAYFPLTGLENSELGLPPELVMAIARRESEFNHTVSSHAGALGLMQVMPDTARSMARRIG
EPFEQARLTRDAAYNARLGAAYLAGLRERFGPSIALVAAGYNAGPGRSARWLGEFGDLRG
EVDPVDWVEMIPFDETRNYVMRVAEALPIYRARIKGAPVPLVPSWDLTGGGVKPAPAQPP
VRLARSARPLMPVRTLAGYAAGGVLAEVLGPAPVEEASAVPLNPVRPARAGVRATR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtatcctttccgtgacaggctcctggcgccgctgctggcccttgccctaagccttgcc
caaccggccggggccgaggatgccgggcacctgtcgcgtgcgctggccgcggcggcgatg
cgcgactgggcgaccgcgacggccgaggccgacgcctcgggtcccatcgcccgcgacctg
atccagtggcagcggctgcgggccgggctgggcagctggccggaatatcgcgactttgcc
gcccgcaaccgcgactggcccggcatggcgctgttctggaagcgcggcgatgcggtgctg
cgcgccgacctgccgcctgccgaggtgatcgaatggttcggcccccgccgccccgacacg
ctgaatggtgccatggcgctgatcgcggccttgcaggcgaccgatccgccggccgccaag
gccgagatcgcgcgcttctggaccgagcaggcgctgaccaagcccgaggccgacgccttt
ctggccgcgcatggcaccgaggtcgcggggttgcacgacgcgcggctgatgcggcttctg
gacctgggcgaatggcaggcggcgcaggtggtgctgcccatggcctcggcccccgcgcag
gccctgggccgcgcgcggctggcgctgcaatcggggcaggccggggtggatacgctgatc
ctggccctgccggacgcgcaacggggggatgcggggcttgcgctggaccgtttccgctgg
cgggtctgggccaagatgccggaactggcgcgcgagctgatgctggaacgctcgaccagc
gccgaggcgttgcgcgaccccgccgcctgggccggcaagcgcgccgattacgcccggctg
gcgttgcggcagggcgactgggccttggccgaaaggttggcggcggggcatttcctgccg
ccgggcagcgatgcctattcggatctggaatggcttgcgggctacggcgcgctgcgcggc
ggtgcggccgaccgggcgcttgggcatttccagacgctggaaagggcggtggcgagcccg
atctcgctgtcccgcgcccattactggcagggccgcgcgctggaggccaagggcgacggg
ccgggcgcggacgcggcctatgcccgcgccgccggctatcaatcggcctggtatgggcag
cttgccgcggaaaggctgggcctgccgatgctgcccgacctggccgtcgccgggcgcagc
gaggccagcctgcccgactggcgcggcagcctcttgcgcaccaacccggtctggcaggcc
ggtacctggctggtcgcggcgggcgagcccgatcagggcgcgcgcttcttcctgcacctg
gccgagaccgctgcgcccgaggatatcggccgcatggcgcggatgatgcttgagatgcgg
ctgccctggcacgcgctgcggctggccaaggccgccgccgccaagggcgcggtctatccg
gccgcctattttccgctgacgggtcttgagaacagcgaactgggcctgccgcccgagctg
gtcatggccatcgcccggcgcgaaagcgagttcaaccataccgtctcttcgcatgccggc
gcgctggggctgatgcaggtcatgccggataccgcgcgttccatggcgcggcgtatcggc
gagcctttcgagcaggcgcggctgacccgcgacgccgcctataacgcgcggctgggcgcg
gcctatctggcagggctgcgcgaacgcttcggcccctcgatcgcgctggtcgcggcgggc
tacaatgccgggccgggccgctcggcccgctggctgggcgagttcggcgacctgcgcggc
gaggtcgatccggtcgattgggtcgagatgatccccttcgacgagacccgcaactatgtc
atgcgggtggccgaggcgctgcccatctatcgcgcccgcatcaagggggcgccggtgccg
ctggtgccgagctgggatctgacgggcggcggcgtgaagcccgcgcctgcgcagccgccg
gtccggcttgcgcgttccgcccggccgctgatgcctgtgcgcacgctggccggctatgcc
gcgggcggggtgctggccgaggtcttgggcccggccccggtcgaggaggccagcgccgtg
ccgctcaaccctgtccggcccgctcgcgctggcgtgcgcgccaccaggtga
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