Planococcus donghaensis: BCM40_13375
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Entry
BCM40_13375 CDS
T04451
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pdg
Planococcus donghaensis
Pathway
pdg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCM40_13375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdg03019
]
BCM40_13375
03110 Chaperones and folding catalysts [BR:
pdg03110
]
BCM40_13375
03029 Mitochondrial biogenesis [BR:
pdg03029
]
BCM40_13375
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdg04147
]
BCM40_13375
Enzymes [BR:
pdg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BCM40_13375
Messenger RNA biogenesis [BR:
pdg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BCM40_13375
Chaperones and folding catalysts [BR:
pdg03110
]
Heat shock proteins
HSP60 / Chaperonin
BCM40_13375
Mitochondrial biogenesis [BR:
pdg03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BCM40_13375
Exosome [BR:
pdg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BCM40_13375
Exosomal proteins of other body fluids (saliva and urine)
BCM40_13375
Exosomal proteins of breast cancer cells
BCM40_13375
Exosomal proteins of colorectal cancer cells
BCM40_13375
Exosomal proteins of bladder cancer cells
BCM40_13375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ANU24286
UniProt:
A0A1C7EKV2
LinkDB
All DBs
Position
539386..541017
Genome browser
AA seq
543 aa
AA seq
DB search
MAKDIKFSEDARSLMLKGVDKLADTVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE
LENAFENMGAKLVAEVASKTNDIAGDGTTTATVLAQAMIREGLKNVTAGANPVGIRHGIE
LAVESALSELKAISKPIEGKESIAQVAAISSGDEEVGKLIAEAMERVGNDGVITLEESRG
FTTELDVVEGMQFDRGYQSPYMVTDSDKMEAVLENPFILVTDKKIGNIQEILPVLEQVVQ
QSKPLLIVAEDVEGEALATLVVNKLRGTFNAVAVKAPGFGDRRKAMLEDIAALTGAEVIT
EDLGLELKTTNIAQLGRASKVVVTKENTTIVEGAGNQEHIVARVGQIRNQLEESTSEFDK
EKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNV
YNKVAELLESQEGDVATGINIVLRALEEPVRQIATNAGLEGSIIVHRLKTEEVGIGYNAA
NGEWVNMVEEGIVDPTKVTRSALQNAASVAAMFLTTEAVVADIPEPAGQGGGMPDMGGMG
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatattaagttcagcgaagatgcacgcagtttaatgctgaaaggcgtagat
aaattagcagacacagtaaaagtaacgcttggaccaaaagggcgtaacgtagtgcttgag
aaaaaattcggttcgccgttaatcaccaacgatggtgtgacaatcgcaaaagaaatcgaa
cttgaaaatgcttttgaaaacatgggcgcgaaacttgttgcggaagttgcttctaaaaca
aacgacatcgcaggtgacggtacaactactgcaaccgttcttgcacaagcaatgattcgt
gaaggcttgaaaaacgtaacagctggcgcaaacccagtgggcatccgtcatggtattgaa
ctcgcagttgaaagcgcacttagcgaattaaaagcaatttcaaaaccaatcgaaggcaaa
gaatccattgcacaagttgcagcgatttcgtctggtgacgaagaagtcggcaaactgatt
gcagaagcaatggagcgcgttggtaacgacggcgtaatcacgctagaagaatcacgtggc
tttacaacggaacttgatgtggttgaagggatgcagtttgatcgcggctaccaatcgcca
tacatggtaactgattcagataaaatggaagctgttttagaaaatccgtttattttagta
actgacaagaaaattggcaacatccaagaaatcctaccagttcttgagcaagtggttcaa
caaagcaaaccgttacttatcgtagctgaagacgttgaaggcgaagcgttagcaacatta
gttgtgaacaaattgcgtggcacgtttaacgcagtagctgtaaaggcaccaggcttcggt
gatcgtcgcaaagcaatgcttgaggatattgcagcattaactggcgcagaagtgattaca
gaggatctaggacttgaattgaaaacaacaaacattgcgcaactaggtcgcgcatctaaa
gtagttgtaacaaaagaaaacacgacaatcgtagaaggcgctggcaaccaagagcacatc
gttgcgcgcgttggccaaatccgtaaccaattagaagagtcaacttctgaattcgacaaa
gaaaaactacaagaacgtttagcgaaattagctggcggcgtagcagttatcaaagtcgga
gcggctacagaaactgaattgaaagaacgtaaacttcgtattgaagatgcattgaactca
actcgtgcagctgtagaagaaggaattgttgccggcggtggtactgcattagtcaacgtt
tacaacaaagtagcagaacttcttgaatcgcaagaaggcgacgtggcaacaggaatcaac
atcgtacttcgtgcgcttgaagaaccagttcgtcaaatcgcaacaaacgcaggtcttgaa
ggatcaatcatcgttcaccgtctgaaaacagaagaagtcggcattggctataacgctgct
aatggcgaatgggtgaacatggtcgaagaaggaattgtggatccaacgaaagttacccgt
tcagcattgcaaaacgcagcatctgttgcagcgatgttcttgacgactgaagcagtagtc
gcagacattcctgaaccagcaggacaaggcggcggcatgcctgatatgggcggcatgggc
ggcatgatgtaa
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