KEGG   Pseudomonas aeruginosa DK2: PADK2_27920
Entry
PADK2_27920       CDS       T02161                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pdk  Pseudomonas aeruginosa DK2
Pathway
pdk00300  Lysine biosynthesis
pdk00470  D-Amino acid metabolism
pdk01100  Metabolic pathways
pdk01110  Biosynthesis of secondary metabolites
pdk01120  Microbial metabolism in diverse environments
pdk01230  Biosynthesis of amino acids
Module
pdk_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pdk00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PADK2_27920
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PADK2_27920
Enzymes [BR:pdk01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     PADK2_27920
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AFM67845
LinkDB
Position
6041307..6042554
AA seq 415 aa
MDTFSYRDGELFAEGVALSRIAERFGTPTYVYSRAHIEAQYRAYADALAGMPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGDPAKVVFSGVGKTRDDMRRALEVGVH
CFNVESGEELERLQRVAAELGVKAPVSLRVNPDVDAQTHPYISTGLKENKFGIAIDEAEA
VYARAAELDHLEVIGVDCHIGSQLTQLEPFLDALERLLGLVDRLAGKGIGIRHLDLGGGL
GVRYRDEQPPLAGDYIRAIRERLHGRDLTLVFEPGRSIVANAGVLLTRVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVQAVRPRDAAPRRYDLVGPICETGDFLAKDRDLALAEGD
LLAVRSAGAYGFVMSSNYNTRGRAAEVLVDGEQTHEVRRRETVQELYAGESLLPQ
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggacacattcagttaccgcgacggtgagctgttcgcggaaggggtggcgctttcccgc
atcgccgagcgtttcggcacgcccacctacgtctattcccgcgcacacatcgaggcccag
taccgcgcctatgccgatgccctcgccggcatgccgcatctggtctgcttcgcggtcaag
gccaactccaacctcggggtgctgaatgtgctggcgcgcctcggcgccggtttcgacatc
gtttcccgcggtgagctggagcgtgtcctggccgccggcggcgatccggccaaggtggtg
ttctccggcgtcggcaagacccgcgacgacatgcgccgcgccctggaagtcggcgtgcac
tgcttcaacgtcgagtccggcgaagagctggagcgcctgcaacgggtagctgcggaactc
ggcgtgaaagcgccggtatcgctgcgggtcaacccggacgtggacgcccagacccacccc
tatatctccaccggcctgaaagagaacaagttcggcatcgccatcgacgaggccgaggcg
gtctacgcccgcgccgccgagcttgaccacctggaggtgatcggcgtcgactgccacatc
ggctcgcagttgacccagctggagcccttcctcgacgccctcgagcgcctgctcgggctg
gtcgaccgcctggccggcaaaggcatcggcattcgccacctggacctcggtggtggcctc
ggggtgcgctaccgcgacgaacagccgccgctggccggcgactacatccgcgccatccgc
gagcgcctgcacggccgcgacctgaccctggtgttcgagccgggccggtccatcgtcgcc
aacgccggcgtgctgctgacccgtgtcgagtacctcaagcacaccgagcacaaggatttc
gccatcgtcgacgcggcgatgaacgacctgatccgcccggctctctaccaggcctggatg
gacgtgcaggcggtacgcccgcgcgacgccgcgccgcgccgctacgacctggtcgggccg
atctgcgagaccggtgacttcctcgccaaggatcgcgacctggcgctcgccgaaggcgac
ctcctggcggtgcgctcggccggcgcctacggcttcgtcatgagctcgaactacaacacc
cgcggccgcgccgccgaggtgctggtggatggcgagcagacccacgaggtccgtcgccgc
gagaccgtccaagagctctacgccggcgaaagcctgctgccgcagtga

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