Pseudomonas sp. ATCC 13867: H681_12825
Help
Entry
H681_12825 CDS
T02524
Name
(GenBank) helicase c2
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pdr
Pseudomonas sp. ATCC 13867
Pathway
pdr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pdr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
H681_12825
09124 Replication and repair
03420 Nucleotide excision repair
H681_12825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdr03021
]
H681_12825
03400 DNA repair and recombination proteins [BR:
pdr03400
]
H681_12825
Enzymes [BR:
pdr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
H681_12825
Transcription machinery [BR:
pdr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
H681_12825
DNA repair and recombination proteins [BR:
pdr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
H681_12825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
Motif
Other DBs
NCBI-ProteinID:
AGI24435
UniProt:
M4XGK2
LinkDB
All DBs
Position
2863760..2866075
Genome browser
AA seq
771 aa
AA seq
DB search
MSYAIAVRALCEFTAKEGDLDLRFTPAPTAQEGMAGHATVVSRRGLGYIAELPLRGEYPG
LVVSGRADGYDPNENLLEEIKTHRGDVARIPQNHRLLHWAQVKVYGWLLCQTLEIDAIDL
AVVYFNVITQKETEFRERFAAEDLRAFFELQCQRFVQWAEQESAHRVERDQGLETLRFPY
ADFRQGQRMLAESVYRAARDGQTLMAQATTGIGKTLGTLFPQLKAFPGQQLDRLFFLTAK
TPGRRLALDALATLRQQEAAQPLRVLEHVARDKACEHPDKACHGESCPLAKGFYDRLPAA
REAALKQCWLTQEAVRKVALEHQVCPYYLSQELCRWSDVVVGDYNYYFDMTALLYGLTVL
NDWKVTLLVDEAHNLIERGRGMYSAELDQGEFNALRKVAPAKLKSALERVGRHWNQLHQD
QDVEYQIYPTIPDLFIAALQKAVSAITDHLTDQPTGNEAELLRFYLDAMLFCRLAEAYGP
HSLFDITRHDVSARRVLSTLCLRNVVPAPFLAERFKVAHSTTLFSATLTPAHYYADLLGL
PEDTGWREVESPFHAEQLEVHALSNLSTRYQHREASLTPISTLMARQFRTRPGNYLAFFS
SYAYLQQALDRFTAEHPDIPHWAQSRSMNELERQAFLDRFTTGSRGIGFAVLGGAFGEGI
DLPGERLIGAFIATLGLPQVNEVNEEIKQRMQGMFGDGYDYTYLFPGLQKVVQAAGRVIR
TPTDSGVIYLLDDRFNQPAVRRLLPGWWKPERLKFIADPPRSKAPQGYLLL
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgccatcgccgtgcgcgcgctgtgcgaattcaccgccaaggaaggtgacctc
gacctgcgcttcacccccgctcccacggctcaggaaggcatggccgggcacgccacggtg
gtctcccgccgcgggctgggctacatcgccgaactgccgttgcgcggcgaatacccgggg
ttggtggtcagcggccgcgccgacggctacgacccgaacgaaaacctgctggaagagatc
aagacccatcgcggcgacgtcgcacgcatcccgcagaaccaccggctgctgcactgggcg
caggtgaaggtatatggctggctgctctgccagaccctggagatcgacgccatcgacctg
gccgtcgtctacttcaacgtcatcacccagaaggagaccgagttccgcgagcgcttcgcc
gccgaggacctgcgcgccttcttcgagctgcaatgccagcgcttcgtgcaatgggccgag
caggaaagcgcccaccgcgtcgagcgcgaccaggggctggagacgctgcgcttcccctac
gccgatttccgccagggccagcgcatgctcgccgagtcggtgtaccgcgccgcccgtgac
ggccagacgctgatggcgcaggccaccaccggcatcggcaagaccctcggcaccctgttc
ccgcagctcaaggccttccccggccagcaactggaccgcttgttcttcctcactgccaag
actcccggccggcgcctggcgctggacgccctggcgaccctgcgccagcaggaggccgcc
cagccgctgcgggtgctcgagcacgtcgcccgcgacaaggcctgcgagcacccggacaag
gcctgccacggcgagtcctgcccgctggccaagggtttctacgaccgcctgcccgccgcc
cgcgaggccgcgctcaagcagtgctggctgacccaggaggcggtgcgcaaggtggcactg
gagcaccaggtctgcccctactacctgagccaggagctgtgccgctggtccgacgtggtg
gtcggcgactacaactattacttcgacatgaccgccctgctctacggcctcaccgtgctc
aacgactggaaggtcaccctgctggtggacgaggcgcacaacctcatcgagcgcggccgc
ggcatgtacagcgccgagctggaccagggcgagttcaacgccctgcgcaaggtcgccccg
gccaagctgaaaagcgcgctggagcgcgtcggccggcactggaaccagctgcaccaggac
caggatgtggagtaccagatctacccgaccatccccgacctgttcatcgccgcgctgcag
aaggccgtcagcgccatcaccgaccacctcaccgaccagcccaccggcaacgaggccgag
ctgctgcgcttctacctcgacgccatgctcttctgccggctggccgaggcctacggaccg
cactcgctgttcgacatcacccgccacgacgtcagcgcacggcgcgtgctttcgaccctg
tgcctgcgcaacgtggtgccggcgcccttcctcgccgagcgcttcaaggtggcccacagc
accacgctgttctccgccaccctgaccccggcgcactactacgccgacctgctcggcctg
cccgaagacaccggttggcgcgaggtggagtcacccttccacgccgaacagctggaagtc
cacgcgctgagcaacctgtccacccgctaccagcaccgcgaggccagcctcacgccgatc
agcaccctgatggcccggcagttccgtacgcggcccggcaattacctggccttcttcagc
agctacgcctacctgcaacaggcgctggaccgcttcaccgccgagcacccggacatcccg
cactgggcacagtcgcgcagcatgaatgaactggagcgtcaggccttcctagaccgcttc
accaccggctcgcgcggcatcggctttgccgtgctcggcggtgctttcggcgaaggcatc
gacctgccgggtgagcgcctgatcggcgccttcatcgccacgctgggcctgccgcaggtg
aacgaggtgaatgaagaaatcaagcagcgcatgcaggggatgttcggcgacggctacgac
tacacctacctgttccccggcttgcagaaggtcgtccaggcggcgggccgggtgatccgc
acaccgacggattcgggggtgatctacctgctcgacgaccgcttcaaccagccggcggtg
cggcggttgctgccggggtggtggaagccggagcggctgaagttcatcgccgatccgcca
cgctcgaaagcgccgcaggggtatctgctgctgtaa
DBGET
integrated database retrieval system
