Pseudonocardia dioxanivorans: Psed_1055
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Entry
Psed_1055 CDS
T01479
Name
(GenBank) Integrase catalytic region
KO
K07482
transposase, IS30 family
Organism
pdx
Pseudonocardia dioxanivorans
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
Psed_1055
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_38
rve
HTH_23
HTH_28
Sigma70_r4_2
HTH_32
HTH_29
HTH_Tnp_Tc3_1
Terminase_5
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AEA23306
UniProt:
F4CP40
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Position
1113273..1114583
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AA seq
436 aa
AA seq
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MSVIGPPRVPRERVRRFWRARLAGATIAQAAAEVGVSASAGRGWVVESGGMIPDLTEPGG
RYLSLAEREEIAVGWAAGHSRAEIARRLGRHRATIGRELARNRTVRYPRRPPLPDGRPHR
LGPDPGTHGGRDRPQHERLRYRAVVAQAKAEARARRRTPAKLLTHPELAAHVHTRLVEQQ
WSPEQISQTLRRDFPDRPEMWVSHETIYQGVYQALYVQGRGQLRRELAGCLRTGRALRRP
NRLPDQRQHRNQTRIRDKVMISQRPAEVTDRAVPGHWEGDLILGTGNETAIGTLVERTTR
FVLLLHLPGGHGAVQVRDAMIAAMRVLPAMVRRSLTWDQGIELARHAEITMALELPVYFC
DPHSPWQRGSNENTNGLLRQYFPKSTDLSVHTHADLDRVADKLNSRPRKTLDWDTPGERL
TRLLSRPVTTGVATTP
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgatcggtccgccgagggtgccgcgggaacgggtccgccggttctggagggcc
cggttggcgggggccacgatcgcgcaggccgccgcggaggtgggggtgtcggcctcggcc
gggcgggggtgggtcgtcgagtctggtgggatgatcccggacctgaccgagcccggcggg
cgttatctgtccctggccgaacgtgaagagatcgccgtgggctgggcggccgggcacagc
cgggccgagatcgcccggcggctgggccgccaccgcgccaccatcggccgggaactggcc
cgtaaccgcaccgtgcgctatccacgccggcccccgctgcctgacgggcgcccgcaccgc
ctggggccagacccgggcacgcacggcggccgggaccggccccagcacgaacggctgcgg
taccgggcggtggtggcccaggccaaagccgaggcccgcgcccgccgccgcacacccgcc
aaactcctcacccaccccgagctggccgcccacgtacacaccaggctggtcgagcagcag
tggagcccggagcagatcagtcagactctgcgccgagacttccccgaccggccggagatg
tgggtgtcccacgaaaccatctaccagggcgtctaccaggccctctacgtccaaggccgc
gggcagctgcgccgcgagctcgcggggtgtctccggaccgggcgggcgttgcgccgcccg
aaccggctgcccgaccaacgccaacaccgcaaccagacccggatccgggacaaggtcatg
atctcccagcggcccgcggaggtcaccgaccgggccgtgcccgggcactgggaaggcgat
ctcatcctcggcaccggcaacgagaccgcgatcggcacgctggtcgagcggaccacccgg
ttcgtgttgctgctgcacctgcccgggggccacggcgcagtccaggtccgggacgcgatg
atcgccgcgatgcgggtgctgcccgcgatggtgcgccggtcgttgacctgggaccagggc
atcgagctggcccgccacgccgagatcaccatggcgctggagttgccggtctatttctgc
gacccacacagcccctggcagcggggcagcaacgagaacaccaacgggctgttgcgccag
tacttcccgaaaagcaccgatctgtccgtgcacacccacgccgatctggaccgggtcgcg
gacaagctcaactcccgcccccgcaaaaccctggactgggacacccccggggaaagactg
acccgactactgtcgcggccagtaaccaccggtgttgcgaccaccccctga
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