Pseudonocardia dioxanivorans: Psed_1140
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Entry
Psed_1140 CDS
T01479
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
pdx
Pseudonocardia dioxanivorans
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdx03021
]
Psed_1140
Transcription machinery [BR:
pdx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Psed_1140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
DUF4440
SnoaL_2
MTA_R1
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AEA23391
UniProt:
F4CSI6
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All DBs
Position
1209256..1210143
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AA seq
295 aa
AA seq
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MTDGTDPAIDVVVRERRQLLNLAYRLLGSLAEAEDAVQETYARWYGLSDEGRRGIGNPGA
WLTRVAGRVCLDQLRSARAARETYVGDWVPEPLPEPADPADPASQVTLDESVTMAFLVVL
DAMTPAERVAFVLHDVFRYPFAEVAEVVGRTPAACRQLATSARRRIGAAPAAVSGAAGQA
AVVRDFRRAWEAKDIAALVGLLDPDVVAVADGGGVVPAHREPIRGGEQVARAYVEISRVA
PGVTLLERTVNGLPGLVARKDGATLTVFAFDVVAGRITRIWAVRNPAKLRTWAPA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgacagacggtacggatcccgcgatcgacgtggtcgtgcgcgagcgacggcagctgctc
aacctcgcctaccgcctgctgggctcgctcgccgaggccgaggacgcggtgcaggagacc
tacgcacgctggtacggcctttccgacgagggccgccgcggcatcgggaacccgggcgcc
tggctgacccgggtcgccgggcgggtgtgcctggaccagctccgctcggcgcgggccgcc
cgcgagacgtacgtcggggactgggtccccgagccgctgcccgaacccgccgacccggcc
gatcccgcttcacaggtgacgctcgacgagtccgtgacgatggcgttcctggtggtgctc
gacgccatgaccccggccgagcgggtcgcgttcgtcctgcacgacgtgttccgctacccg
ttcgccgaggtcgccgaggtcgtcgggcgcaccccggcggcctgccggcagctggcgacg
tccgcccggcgccggatcggggcggccccggccgcggtctccggggcggccggacaggcc
gcggtcgtccgggacttccggcgggcgtgggaggccaaggacatcgccgcgctcgtcggg
ctcctcgacccggacgtggtggcggtcgccgacggcggcggagtcgtgcccgcgcaccgg
gagccgatccgtggcggtgagcaggtggcccgcgcctacgtcgagatctcccgcgtggcg
cccggagtgacgctgctggaacgcaccgtcaacggcctgcccggcctggtcgcccggaag
gacggggcgaccctcacggtcttcgccttcgacgtcgtggccggccggatcacgcgcatc
tgggcggtccgcaaccccgcgaagctccggacgtgggccccggcctga
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