Pectobacterium parmentieri SCC3193: W5S_3756
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Entry
W5S_3756 CDS
T02514
Name
(GenBank) Carbohydrate diacid regulator
KO
K02647
carbohydrate diacid regulator
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pec03000
]
W5S_3756
Transcription factors [BR:
pec03000
]
Prokaryotic type
Helix-turn-helix
Other families
W5S_3756
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
GAF
CodY
Motif
Other DBs
NCBI-ProteinID:
AFI91819
UniProt:
A0A0H3ICQ8
LinkDB
All DBs
Position
complement(4044464..4045618)
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AA seq
384 aa
AA seq
DB search
MADYDFDDKLARSIVTRTMQIIDCNVNVMDARGRIIGSGDKERVGEIHEGALLALTQERI
VNIDDASVHMLQGVRPGVNLPLRLNGNIVGVIGLTGTPAGLRQYGELVCMTAEMMLEQAR
LLQLLAQNSRLREELVLSLVRSSAYSATQCEWAQRLGVDLQKPRIAMVVELDSGQLGVST
AMTELQQLQSLLMETDKDDLMAIVSLTEMVVLKPAFIHAERWEPEEHKRRMEKLYHRLQE
GSSLRVRLALGNFFPGDGGVERSYHTAKTTMKAGKQRMPETPCYCYQDMELPVLLDSLRG
GWQANELVRPLRRLKAMDSNGVFRKTLHTWFRHNLQAAVTANALYIHKNTLEYRLRRISE
LTGLNLANFDDRFLLYVAVQLDDD
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggctgactatgattttgatgataaattggcgcgctctattgtgacaaggacaatgcag
attattgattgcaatgtgaatgtcatggatgcgcgagggcggattatcggcagtggtgat
aaggaacgtgttggcgaaatacatgaaggcgcactgttagcgctcacgcaggaacgtatt
gttaatattgatgacgcatccgtgcatatgctacagggggtcaggccgggtgttaatctg
ccgctacgtttaaatgggaatattgtcggcgtgattgggctaacgggtacgccagcgggg
ttgcgtcaatatggtgaattagtctgtatgacagcggaaatgatgctggaacaggcacga
ttactccaactactggcacaaaatagccgtttgcgagaagagttggtactcagtctggtg
cgcagttctgcctattcagccacgcagtgcgaatgggcgcagcgattaggggtcgatctg
caaaagccccggattgcgatggttgttgaattggacagcgggcaactgggggtcagcact
gcgatgacagaactccagcagttgcagtcactgttgatggaaaccgataaagatgacctg
atggcgatagtctctctgactgagatggtggtacttaagcccgcgtttatccatgcagaa
cggtgggagcctgaagaacataaacggcgaatggagaagttatatcatcgactgcaagaa
ggaagctctctgcgtgtgcgtctggcattaggcaacttttttcccggtgacggcggcgtt
gagcgttcataccatacggcaaaaaccactatgaaagcaggtaagcagcgcatgccagaa
acaccatgctactgctatcaggacatggagttacctgtcctcctcgatagcctacgtgga
ggatggcaggccaacgaactggtgcgtccactgcgccgtctaaaagcgatggatagcaat
ggggtattcagaaaaacgctgcatacctggttcagacataatttacaggccgccgtcacc
gcgaatgcgctctatattcataagaatacgctggaataccgactgcggcgtatttctgaa
ctgacaggactcaatctggcaaattttgacgatcgtttcttgctttatgtcgcggtacag
ttggacgatgactaa
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