Pectobacterium parmentieri SCC3193: W5S_4775
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Entry
W5S_4775 CDS
T02514
Name
(GenBank) Transcriptional regulator YidN, Cro/CI family
KO
K23779
XRE family transcriptional regulator, regulator of sulfur utilization
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pec03000
]
W5S_4775
Transcription factors [BR:
pec03000
]
Prokaryotic type
Helix-turn-helix
XRE family
W5S_4775
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Gene cluster
GFIT
Motif
Pfam:
Cupin_2
HTH_3
HTH_31
HTH_25
Cupin_3
HTH_19
AraC_binding
HTH_26
MannoseP_isomer
AraC_binding_2
HutD
dnstrm_HI1420
Cupin_6
HTH_37
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AFI92815
UniProt:
A0A0H3IBN5
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Position
complement(5132765..5133331)
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AA seq
188 aa
AA seq
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MSDELTRRIGDTLKTLRQEKGWSLTRAAEETGVSKAMLGQIERGESSPTVATLWKIATGL
NVAFSTFIEPTLADEGVTYRSGAGSTFRESAAGMRAVPLFPYDEKLRFDMLVIELAAGAG
STSSPHENGVIEHIIVLEGQLEITVDGQTHLLSTGDALRFAADREHRYHNPTDTTVRFHD
LIHYPDKN
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgaactaacccgtcgtattggcgatacattgaaaacattaaggcaggagaaa
ggctggagcctcacgcgagcagcggaagaaacgggagtcagcaaagcaatgctcggccaa
atcgagcgtggtgaatccagcccgacggtcgctaccctgtggaaaattgcgaccggtctg
aatgtcgcgttctctacctttattgaaccgacgctcgcggatgaaggtgtgacgtatcgc
tcaggggcaggttcaacgttcagggaaagtgccgcaggaatgcgcgctgtgccactcttt
ccctacgacgaaaaactgcgtttcgatatgctggttattgaactggctgcaggtgccggc
agcacgtcatcgccacatgaaaacggggtgatcgagcatattattgtgttggaaggccag
ttggagatcaccgttgatggccagacgcacttattgtccaccggtgacgccctgcgcttt
gctgccgacagggagcaccgctaccacaaccctaccgacaccacggtgcgcttccacgat
ttgatccactatcctgataaaaactaa
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