KEGG   Pseudonocardia sp EC080619-01: AD017_26855Help
Entry
AD017_26855       CDS       T04234                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
pecq  Pseudonocardia sp EC080619-01
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pecq00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    AD017_26855
Enzymes [BR:pecq01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     AD017_26855
DNA repair and recombination proteins [BR:pecq03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     AD017_26855
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(5837596..5838486)
Genome map
AA seq 296 aa AA seqDB search
MTNPDKVLYPATGTTKAEVLGHYLAVAEAMLPHLESRPATLKRWPDGVESSSFFEKNVSR
HAPSWLRTARVGTPGGRSESADFAVITDAEGLAWAANLAALELHVPQWRLGPRDGRHPPD
RVVFDLDPGEGTTVVDCCRIALRLRALLDEHGLPVYPSTSGGKGMQLYLPVRVTEPERTS
EFAREVAERLAAEHPRETIAVMTRARRRGKVFVDWSQNNTAKTTIASYSLRGRERPTVAT
PVTWDEVDACREAGDLVFTCDDLPGRLDTHGDLMRPLLDTEGFRLPRGGAIFEVPG
NT seq 891 nt NT seq  +upstreamnt  +downstreamnt
ctgaccaacccggacaaggtgctgtacccggccaccggcacgacgaaggccgaggtcctc
gggcactacctcgccgtcgccgaggcgatgctgccgcacctggagagccgccccgccacg
ctgaagcgctggccggacggggtggagtcgtcgtcgttcttcgagaagaacgtgtcccgg
cacgcgccgtcgtggctgcgcacggcacgggtcggcacgcccggcggccggtccgagtcg
gccgacttcgcggtgatcaccgacgccgaggggctggcctgggcggcgaacctcgcggcg
ctggagctgcacgtcccgcagtggcggctcggcccgcgcgacggcaggcacccaccggac
cgtgtcgtgttcgacctcgatcccggtgaggggacgaccgtcgtcgactgctgccggatc
gcactgcggctgcgcgcgctgctcgacgagcacgggctgccggtgtacccgtcgacgtcc
ggcggcaagggcatgcagctctacctgccggtgcgggtcacagagcccgagcgcacctcc
gagttcgcccgggaggtcgccgagcggctcgccgccgagcacccgcgggagacgatcgcg
gtgatgacccgcgcccgtcgccggggaaaggtgttcgtcgactggagccagaacaacacg
gccaagacgacgatcgcctcgtactcgctgcgcgggcgcgagcggccgaccgtggccacc
cccgtcacctgggacgaggtggacgcctgccgcgaggccggggacctggtgttcacctgc
gacgacctgcccggccggctggacacccacggtgacctgatgcgtcccctgctggacacc
gagggtttccggctcccccgtggtggggcgatcttcgaggtgccaggctga

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