Syntrophotalea acetylenivorans: A7E78_07365
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Entry
A7E78_07365 CDS
T04594
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pef
Syntrophotalea acetylenivorans
Pathway
pef03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pef00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A7E78_07365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pef03021
]
A7E78_07365
03400 DNA repair and recombination proteins [BR:
pef03400
]
A7E78_07365
Enzymes [BR:
pef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A7E78_07365
Transcription machinery [BR:
pef03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A7E78_07365
DNA repair and recombination proteins [BR:
pef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A7E78_07365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF5667
DUF211
Motif
Other DBs
NCBI-ProteinID:
APG27672
UniProt:
A0A1L3GP28
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All DBs
Position
complement(1642709..1643725)
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AA seq
338 aa
AA seq
DB search
MYKNWRDLIKPKRLQIESDSLSDTYGKFKAEPFERGFGTTLGNALRRVLLSSLQGAAITS
VRIKGVLHEFSTIPGVTEDVTDIILNLKGVLLKLHGNEVRNIRIVKKGAGVITAGDIVTD
SHVEVLNPDHHILTCSKEADVEMDMVVAMGKGYVPAERNRDEKAPVGTIPIDAIFSPIKK
VNFTVTNARVGQITNFDKLNLEVFTDGSVRADDAVAYGAKILKEQLQIFINFDEEAETHG
VDENEESRKINENLYRSVDELELSVRSANCLKNANIHLIGDLVQRSEAEMLKTQNFGRKS
LNEIKDILAEMGLSLGMALEGFPDPEYLKMIREGSEDL
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaaactggagagatctcatcaagcccaagcgcctccagattgaatcggacagt
ctgtccgatacttatgggaagtttaaggcggaaccttttgaacgtggatttggcactact
ttgggtaatgccctgcgccgagttcttttgtcgtctttacagggtgccgctattacgtcc
gtacggattaaaggcgtactccatgagttctcgacaatccccggtgttaccgaggatgtc
accgacattattttgaacctcaagggtgttttgcttaagttgcacggcaatgaggtacga
aacattcgcattgtcaaaaagggtgccggggtaataacggcaggtgacattgtgaccgac
tcacatgtcgaggtgcttaaccctgatcatcatattttgacctgctccaaagaagcggat
gttgaaatggacatggttgtggctatgggtaagggttatgtccctgccgagcgcaatcgt
gatgaaaaggcaccggtaggcaccattccgattgatgctatcttctcgcctatcaagaag
gtgaactttactgtaaccaacgctcgtgttgggcagatcaccaactttgataagctgaat
ctcgaggtctttaccgatggcagcgtgcgtgctgatgatgctgttgcctacggggctaag
attcttaaggaacagttgcagattttcatcaattttgatgaagaagctgaaacgcacggc
gtcgacgagaatgaagagagtcgaaagattaacgaaaacctctatcgttcagtggatgag
cttgagctttcggtgcgtagcgccaactgcctcaaaaatgccaatattcacctgatcggt
gaccttgtgcagcggtccgaagctgaaatgcttaaaacccagaacttcggacgcaaatca
ctgaatgagatcaaggacatcttggctgagatgggcttgtctctggggatggccctggag
ggttttcccgaccctgaatatcttaagatgattcgtgagggaagtgaggatctttga
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