Pedobacter sp. PACM 27299: AQ505_15590
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Entry
AQ505_15590 CDS
T04140
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
Organism
pep
Pedobacter sp. PACM 27299
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
TonB_dep_Rec
Plug
STN
CarboxypepD_reg
CooC_C
FecR_C
Motif
Other DBs
NCBI-ProteinID:
ALL06789
UniProt:
A0A0P0NIR3
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All DBs
Position
3719593..3723093
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AA seq
1166 aa
AA seq
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MKLTTFLLFAFIMQVSAGTYAQKITLSVKNEELFNVFDKISDQSGYDFIVIYSLLKDAHK
VNINVKDAPLKEVLDQIFKDQPLEFSINNKTVLIKKKESSFIDQLIQRFQEIEVRGKVLD
EHNLPLPGATVKVKGTKKQVLTNSEGAFSLSRIDENAVLVISFLGYQNKEVAAQENMGSI
NLTEQTGQLEEVTVSTGYQTLPKERVTGAFSSVPAKQLEQQRLSSLGSLLEGRVAGYNNG
LIRGTTSMKGVTSPLYVIDGFPVENTKYNTTGSITENVPGLNLEDIESITVLKDAAAASI
YGARAANGVIVIVTKKPKKGKPQISASSTFTLSSGALYTDNLTNSADIIDLEREWERNNP
KLKAANSAAYAANVLTNMGYQSQGIKAILAKYAGTLTQSQLEDKLNQLASSGYQYYDDVE
KYSKRDPFYQQYNVNVGSASESNSFYSSLTYRNNKSADKYTKDESLGLNINNITKINKWL
TLELSNYLSYNGGKQQNYNTLSPQYTFLPYDRLKNTDGSNFISTGASRLSANTLSLINSN
GLYNVDINPLDEQSKNLGQLKSFNNRSFVKLNAEITPWLSYRSTFQYEFSSDRFNRLYDK
STYYVRNMVNSFATKVANGPVTFNLPYGNINYDQDQFTSSYNFRQQFNIDKTFGDKHNLT
AIVGTEIRNAKLEFEDQYLYNYDPNVLTFDLINAKSLGLLQGPILGGGNFSSSNIASQRE
NVNRFVSIYANAGYAYDSKYLLTGSLRWDRSNLWGTNSKYQNKPLWSVGAGWNIYKESFF
NVDWVDLLKLRVSHGIAGNISKDAAPYMTAYYNNNNNVGGLQGTIGTRPNPLLSWEKTTT
NNLGLDFAVFKNRISGSLDYYNKQGKDLLASTMGVPTEGFGYSTYAINNGEMTNKGIELS
ISGDVIRSKDLTWNASILYAHNKNKVTYVNVEAPVYYLQLDYPQAYPRIGNPYNAIYSYR
WAGLSADGLPQVYNEKGEKVLNSPGTLGSIVYSGSTVPTYSGAFNNLFEYKNFSLSFLLT
FEGGHKMRNTFLPVLGSAYNAALGGYVTQITAVNKDITDRWKTPGDENRTAIPRLVFGED
PAYNSQSAEIYQKADINVIDASNIRLRNVSLSYRLPKALVKKAYMENVRFQFNVENAFTI
AKSKAAKYLLNGYRPANFVWGVYVNF
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaaccacttttctcttatttgcatttatcatgcaagtcagtgccggaacctat
gcccagaaaatcactttatctgtgaaaaatgaggaactgttcaatgtttttgataaaatc
agtgatcagagcggctatgattttattgtcatttattccctgctgaaagatgcgcacaaa
gtaaacatcaatgtaaaagatgccccattaaaagaggtactggatcagatctttaaagac
cagccattggaattcagcatcaacaacaagaccgtattgatcaagaaaaaggaaagcagt
tttattgatcagctgatccagcgttttcaggaaattgaggtgagaggaaaagtgctggat
gagcataaccttccccttccgggagcaacggtaaaggttaaaggaacaaaaaagcaggtg
ctgacgaattcagagggcgcatttagcctgagtcgtattgatgagaatgcggtccttgtc
atttcatttctgggttatcagaataaggaagtcgccgctcaggaaaatatgggcagtatc
aatttgacggagcaaaccgggcagctggaagaagtgaccgtttctacaggataccagact
ttaccaaaagaacgcgtgacgggtgcattttccagcgtacctgcaaagcagcttgagcag
caaagactcagcagtctgggctctttacttgaaggcagggttgcaggatataacaatggc
ctgatcagagggacaacctctatgaaaggtgtcaccagtccgttatatgtaatcgatggt
tttccagtagaaaacacaaaatacaatactacaggatcaattacggagaatgtaccgggt
ctgaatctggaagatattgaatcgatcaccgtcctgaaagacgctgcggcggcctctatt
tacggcgcaagagcggcaaatggggtgattgtgattgtgacaaaaaagcctaaaaaaggc
aaacctcagatctctgcctccagcacatttacactttcctcaggcgctttatataccgac
aacctgactaattcggcagatattattgatctggaaagagaatgggaaagaaacaatcca
aagttaaaagctgcaaattcggctgcttatgcagcgaatgtattgacaaatatgggctat
caaagccagggcattaaagctattcttgcaaaatatgcaggaacattgacgcagtcgcaa
ttggaggacaagttaaatcagctggcttcttccggttatcaatactatgatgatgtagaa
aaatacagcaaacgtgatcctttctatcagcaatacaatgtcaatgttggcagtgcttct
gaaagcaactccttttattcgtcattgacctaccgtaataataagtcggcagacaaatat
acgaaagatgaaagcctgggtttaaacattaacaacatcacaaaaatcaataaatggctg
accttggaactcagcaattacctttcttataacggcgggaaacagcagaattacaacacc
ttatcaccacaatacactttcctgccttatgaccgtctgaaaaataccgatggcagcaat
tttatttctacaggggcttccagactgagtgcgaataccttatcgctgatcaatagcaac
ggcctctacaatgtggacattaacccattggatgagcaaagcaaaaaccttgggcaattg
aaaagtttcaacaacaggtccttcgttaaattaaatgcggagatcacgccatggctgtct
taccgttctacttttcaatacgagtttagttcagatcgtttcaataggctgtacgacaaa
agcacttactatgtaagaaatatggtcaacagctttgcgacgaaggttgccaatgggccg
gttacttttaacctgccgtatggaaacatcaattacgatcaggatcagttcacttcttct
tataatttccgtcagcaattcaatatcgacaaaacctttggagataaacataacctgacg
gccatcgtgggtacagaaatcagaaatgccaagctggaattcgaagatcaatacctatat
aattacgatccgaatgtattgacctttgacctcatcaatgccaaatccttaggactctta
caggggccgattctgggtggtggaaatttttcgagtagtaacatagccagtcagcgggaa
aatgttaacagattcgtctctatttatgcgaatgcgggttatgcgtacgacagtaaatac
ctgcttaccggaagtttgcgctgggaccgttctaacttatgggggaccaattcaaaatat
cagaataaaccactatggtctgtcggtgccggatggaatatttacaaagagtctttcttt
aatgtggattgggtagacctgttaaaattaagggtgtcgcatggtattgccggaaatatt
tccaaagatgcagcgccctacatgactgcctattacaacaacaataacaatgtaggtggt
ttacaaggtaccataggtacccgtccaaatcccctattgtcctgggaaaaaaccaccact
aacaacctgggcttagattttgctgttttcaaaaaccgcatcagtggttccctggactat
tataacaaacaagggaaagacctattggcaagcaccatgggggtaccaactgagggattc
ggctattccacctatgcgattaacaatggtgaaatgaccaataaagggattgaattgtcg
atctctggtgatgtgatccgcagcaaagacctgacctggaatgccagtattttgtatgcg
cataacaaaaacaaagtcacctatgtgaatgtcgaggcaccggtatattacctgcaattg
gattacccacaagcctatccacgcatcggaaatccttacaatgcgatttatagttaccgt
tgggcaggcctgagtgccgatgggttaccgcaagtgtataacgaaaaaggagagaaagta
ttgaattccccaggtaccctgggttctattgtgtacagcggttccactgttcctacttat
agcggtgcatttaataacctttttgagtataaaaacttctctctttccttcctgttaact
tttgaaggcggacataaaatgaggaataccttccttccggtattgggaagtgcttacaat
gctgcgcttggaggttatgtgactcagattactgcggtcaataaggacattactgaccgg
tggaagactcctggtgatgagaacagaacagctattccgagactggtttttggagaagat
cctgcctacaatagtcagagtgcagagatttatcaaaaagcagacatcaatgtgattgat
gcttcaaacatccgcctgagaaacgtctccctctcctaccgcttaccgaaagcgctggtt
aaaaaggcatatatggaaaatgtaaggttccagtttaatgtggagaatgcgttcaccata
gcgaaaagcaaagcagcaaagtatttactgaatggataccgcccggcaaattttgtatgg
ggtgtttatgttaatttttag
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