Pseudomonas synxantha LBUM223: VO64_2911
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Entry
VO64_2911 CDS
T03769
Name
(GenBank) Uncharacterized protein ImpA
KO
K11902
type VI secretion system protein ImpA
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
VO64_2911
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfb02044
]
VO64_2911
Secretion system [BR:
pfb02044
]
Type VI secretion system
Imp/Vas secretion system core components
VO64_2911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ImpA_N
Motif
Other DBs
NCBI-ProteinID:
AKA83457
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Position
3237024..3237992
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AA seq
322 aa
AA seq
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MEYDAQFLQLERDAKGQPERSMGDSILPAEPPEWRSIQQQSLDLLQRSKDLRITHFLLQS
SLALQGVAGLAEVLTLINALLREYWADLHPRLDADDDNDPTVRINALSGLTSDTTIRLLR
ESILTRSRTFGPVSLRAALNASGLLSFPDEQLGSQQLNAAFLDSDPELLQATRDALSAAR
AACEAIEQQVNEQVGSAQGVDLSALKQPLKQALQILNQAVPGTDSGSGSDPEAVSDDNAP
SVDYATAPAAPRPTGDIATRDDVLRSLDKILAYYTRHEPSSPLPVLLNRAKNLVHADFAA
IVRNLIPDGMSQFENLRGPDSE
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggagtatgacgcgcaattcttgcaactggagcgtgatgccaagggccagcccgagcgc
agcatgggcgactcgatcctgcccgctgaaccgccggaatggcgcagcatccagcagcaa
agcctcgacttgttgcagcgcagcaaagacctgcgcatcacccacttcctgctgcaaagc
tccctcgccctccagggtgtggccgggctggccgaagtccttacgctgatcaacgccctg
ctgcgcgaatactgggccgacctgcatccgcgcctggatgccgacgacgataacgacccc
accgtgcgcatcaatgccctatccggcttgaccagcgacacgacgattcgcctgctgcgc
gagagtattctcacgcgctcgcgcaccttcggccccgtgagtttgcgcgccgcgcttaac
gcaagcggcctgctgagcttccccgatgagcaactgggcagccagcagctcaatgccgcg
ttcctcgacagcgaccccgaactcctgcaagccactcgcgacgccttgagcgcagcgcgc
gcggcgtgcgaagccatcgaacaacaggtcaacgagcaggtcggttccgcccagggcgtg
gatctcagcgccttgaagcaaccgctcaagcaggccctgcaaattctcaatcaagcggtg
cccggcaccgacagcggcagcggcagcgatcccgaggccgtcagtgacgacaacgccccc
tcggtcgattacgccactgcgcccgcagccccgcgcccgacgggcgacatcgccacgcgg
gatgacgtgctgcgcagcctcgacaaaatccttgcgtattacacccggcacgagccttcg
agcccgctgccggtgttgttgaaccgagcgaagaatctggtacacgccgacttcgcggcc
atcgtgcgcaatctgattcccgacggcatgtcccaatttgaaaacctgcgcggcccggac
agcgagtaa
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