Pseudomonas synxantha LBUM223: VO64_4407
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Entry
VO64_4407 CDS
T03769
Name
(GenBank) Transcriptional regulator, TetR family
KO
K18301
TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
Organism
pfb
Pseudomonas synxantha LBUM223
Module
pfb_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfb03000
]
VO64_4407
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
pfb01504
]
VO64_4407
Transcription factors [BR:
pfb03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
VO64_4407
Antimicrobial resistance genes [BR:
pfb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
VO64_4407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
LacI
Motif
Other DBs
NCBI-ProteinID:
AKA84953
LinkDB
All DBs
Position
complement(4934267..4934902)
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AA seq
211 aa
AA seq
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MSDNPVNTASPGRPKDMAKRQAILEAAKSLFLSNGYANTSMDAVALAAGVSKLTVYSHFT
DKETLFTAAVVAKCEEQLPVMYFELPAGMPVETVLLNIARGFHRLINSEESVNLHRLMMT
TGNQDVKLSQIFFEAGPMRMLQGMERLLGKIDQSGALRIDKPFKAAEHFFCLLKGTANFR
LLYGCGGQLSAVEAEEHVQEVVRLFMRAFRP
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacaatcctgtgaacaccgccagccccgggcgtcccaaggacatggcaaaacgc
caggcaatcctcgaagcggcgaagtccctgttcttgagcaacggttacgcgaacaccagc
atggatgccgtggccctggcggccggcgtatcgaaactcaccgtatacagccatttcacc
gacaaagagacgttgttcactgccgcggtggtggccaagtgtgaagagcaattgccggtg
atgtacttcgagctacccgcaggcatgcccgtcgagactgtgctgttgaacatcgcacgt
ggcttccatcggctgatcaacagcgaggagtcggtgaacctgcatcgcctgatgatgacc
accggcaatcaggacgtgaaactctcacagatcttctttgaagccggccccatgcgcatg
ctgcaaggcatggagcgcctgctcggcaagattgaccagagcggtgccctgcgcatcgat
aaaccgttcaaggcagccgaacacttcttttgcctgctcaagggcacggcgaattttcgc
ttgctgtacggctgcggcgggcaactgagcgccgtagaggccgaagagcatgtgcaggag
gtggtgaggttgtttatgcgcgcattcaggccttga
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