Pseudomonas ogarae: PSF113_2837
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Entry
PSF113_2837 CDS
T01734
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfe
Pseudomonas ogarae
Pathway
pfe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSF113_2837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfe03021
]
PSF113_2837
Transcription machinery [BR:
pfe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSF113_2837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
HTH_23
GerE
HTH_28
HTH_11
DUF2285
HTH_38
Xre-like-HTH
HTH_29
HTH_24
HTH_17
HTH_Tnp_ISL3
HTH_31
DUF6362
HTH_7
HTH_36
TnsD
HTH_40
HTH_AsnC-type
CggR_N
HTH_Mga
DUF1804
Motif
Other DBs
NCBI-ProteinID:
AEV62841
LinkDB
All DBs
Position
3346418..3346837
Genome browser
AA seq
139 aa
AA seq
DB search
MGNAWDAADLRQDTFLRVLSSSQTLADLQEPRAYLLTVGKRLLSNFYTRRNLEQAYLDAL
ASLPEACAPSPEQRWLLLETLQALDELLDGLPPLVRRAFLWSQLEGLGYREIAERLQVSE
RTVKRYMAQAYEHCLLVDF
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatgcctgggatgcggcggacctgcgccaggataccttcctgcgggtgctttcc
agttcccagaccttggctgacctgcaagaaccccgggcttatctgctgaccgttggcaaa
cgcctgctgagcaatttctacacccggcgcaatctggaacaggcgtatctcgacgctctg
gcaagcctgcctgaagcctgcgcaccgtcgccagaacaacgctggctgctgctggaaacc
ctgcaagccctggacgaattgctcgatggcctgccgcccttggtgcgccgggcttttctc
tggagccaacttgaaggcctggggtatcgcgagatcgccgagcgcctgcaagtctccgaa
cgcaccgtaaaacgctatatggcccaggcctatgagcattgcctgttggtggacttctga
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