Pseudomonas ogarae: PSF113_4238
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Entry
PSF113_4238 CDS
T01734
Name
(GenBank) Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pfe
Pseudomonas ogarae
Pathway
pfe00010
Glycolysis / Gluconeogenesis
pfe00020
Citrate cycle (TCA cycle)
pfe00260
Glycine, serine and threonine metabolism
pfe00280
Valine, leucine and isoleucine degradation
pfe00310
Lysine degradation
pfe00380
Tryptophan metabolism
pfe00620
Pyruvate metabolism
pfe00630
Glyoxylate and dicarboxylate metabolism
pfe00640
Propanoate metabolism
pfe00785
Lipoic acid metabolism
pfe01100
Metabolic pathways
pfe01110
Biosynthesis of secondary metabolites
pfe01120
Microbial metabolism in diverse environments
pfe01200
Carbon metabolism
pfe01210
2-Oxocarboxylic acid metabolism
pfe01240
Biosynthesis of cofactors
Module
pfe_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pfe_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pfe_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
pfe_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
pfe_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
PSF113_4238
00020 Citrate cycle (TCA cycle)
PSF113_4238
00620 Pyruvate metabolism
PSF113_4238
00630 Glyoxylate and dicarboxylate metabolism
PSF113_4238
00640 Propanoate metabolism
PSF113_4238
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PSF113_4238
00280 Valine, leucine and isoleucine degradation
PSF113_4238
00310 Lysine degradation
PSF113_4238
00380 Tryptophan metabolism
PSF113_4238
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PSF113_4238
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfe04147
]
PSF113_4238
Enzymes [BR:
pfe01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
PSF113_4238
Exosome [BR:
pfe04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
PSF113_4238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
GIDA
FAD_oxidored
HI0933_like
NAD_binding_8
FAD_binding_3
DAO
AlaDh_PNT_C
3HCDH_N
Thi4
2-Hacid_dh_C
Amino_oxidase
Motif
Other DBs
NCBI-ProteinID:
AEV64234
UniProt:
G8Q3B3
LinkDB
All DBs
Position
complement(4963730..4965166)
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AA seq
478 aa
AA seq
DB search
MTQKFDVVVIGAGPGGYVAAIKAAQLGLTTACIEKYTDKEGKLALGGTCLNVGCIPSKAL
LDSSWKFHEAQDGFKIHGINHAGVTMDVPAMVGRKANIVKGLTSGVATLFKANGVTSIQG
HGKLLMGKKVEVTKPDGSVEVIEAENVILAPGSRPIDIPPAPVDQNVIVDSTGALEFQSV
PKRLGVIGAGVIGLELGSVWSRLGAQVTVLEALDTFLMAADTAVSKEALKTLTKQGLDIK
LGARVTGSKVNGEEVVVTYTDTNGEQTITFDKLIVAVGRRPVTTDLLAADSGVEIDERGF
IQVDDQCATTVPGVFAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQMNYDLIPSVIYTH
PEIAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVI
GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHVANRKKR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgactcagaaattcgacgtggtagtgattggtgcgggccctggcggctacgtagcggcc
atcaaggctgcgcaactgggccttaccactgcctgcatcgagaaatacaccgacaaggag
ggcaagctggccctcggcggtacttgcctgaacgtcggttgcattccttccaaggcgctg
ctggacagctcctggaagttccacgaagcgcaggatggcttcaagatccatggtatcaac
cacgctggtgtgaccatggacgtgccggcgatggtcggtcgcaaggctaacatcgtcaaa
ggcctgacctccggcgttgctaccctgttcaaggccaacggcgtgacctcgatccagggt
cacggcaagctgctgatgggcaagaaagtcgaagtgaccaagccagacggttcggttgaa
gtgatcgaagccgaaaacgtcatcctggcaccaggctcgcgtccgatcgacattccaccg
gctccggtcgaccagaacgtgatcgttgattccaccggcgccctggaattccagagcgta
ccaaaacgcctgggcgtgatcggcgccggcgtgatcggcctcgagctgggttcggtatgg
tcgcgcctgggtgcgcaagtgaccgtactggaagccctcgacaccttcctgatggccgct
gacactgcggtttccaaggaagcgctgaaaaccctgaccaagcagggccttgatatcaag
ctgggcgctcgcgtcaccggttcgaaggtcaacggcgaagaagtcgtggtcacctacacc
gacaccaacggcgaacagaccatcaccttcgacaagctgatcgttgcggtcggtcgtcgt
ccggtgaccaccgacctgctggctgccgatagcggcgtggaaatcgacgagcgcggcttc
atccaggttgatgatcaatgcgccaccaccgtaccgggcgtcttcgccatcggtgatgtg
gttcgcggcatgatgctggcacacaaggcatccgaagaaggcatcatggtcgtcgagcgc
atcaagggccacaaagcccagatgaactatgacctgatcccttcggttatctacacccac
ccggaaatcgcatgggttggcaagaccgagcaggccttgaaagccgaaggcgttgaagtt
aacgtcggcaccttcccgtttgcagccagcggccgcgccatggcagccaacgataccggt
ggtttcgtgaaagtcatcgccgatgccaagacggatcgcgtattgggcgttcacgtcatt
ggcccaagcgcagccgagctggtacagcaaggcgcgatcggcatggaattcggcaccagc
gctgaagatctgggcatgatggtcttctcccatccgaccctgtccgaagccttgcacgaa
gcggccctggccgtaaatggcggcgccatccacgtggccaaccgcaagaagcgttga
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