Pseudomonas simiae PICF7: PFLUOLIPICF714605
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Entry
PFLUOLIPICF714605 CDS
T03767
Name
(GenBank) RNA polymerase subunit sigma-24
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
pff
Pseudomonas simiae PICF7
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pff03021
]
PFLUOLIPICF714605
Transcription machinery [BR:
pff03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PFLUOLIPICF714605
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6596
Sigma70_r2
Sigma70_r4_2
TPR_2
TPR_12
TPR_1
TPR_8
TPR_11
Sigma70_r4
TPR_21
TPR_7
TPR_16
TPR_10
TPR_4
TPR_14
Motif
Other DBs
NCBI-ProteinID:
AJZ94691
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Position
3162389..3163612
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AA seq
407 aa
AA seq
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MTLSVEAVYRSESRRVLATLIRLLGDFNLAEEALHEAFFVAVQRWPLDGVPDNPRAWLVS
TGRFKAIDRLRREARFTPLLQEQADALEAADWSDQDVEDDRLRLIFTCCHPALAADAQAA
LTLREICDLTTEEIARAFLATPATIAQRIVRAKGKIREAKIPYQVPSLDELPERLDSVLR
VIYLVFNEGYSASMGADLTREALTREAIRLGRLLLELLPEPEVMGLLALMLLHESRRPAR
TSANGELVLLDEQDRSLWDAALIAEGCTLVEQALGTRRFGPYGLQAAIAAVHAEASRADE
TDWPQIVGLYDVLLRAAPSPVIELNRAVALAMRDGPLAGLQQVEGILARGELLDYHWVHS
ARGEFCRQLGRVEEARAAYEKALSLTQQAPEKRFLEQRLAELQSPLR
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
ttgaccctgtcggtcgaggccgtttaccgcagcgaatcacgccgggtgctcgcgacgctg
attcgcttgctgggtgacttcaacctggccgaggaagccctgcacgaagcgtttttcgtg
gcggtgcagcgctggccgctggacggtgtgccggacaatccacgggcttggctggtgtcg
actggtcgcttcaaggccatcgaccggctgcgccgcgaggcgcgtttcactccgttgctg
caggaacaggccgatgcgctggaagcggctgactggagtgaccaagacgtggaagacgac
cgcctgcggttgatcttcacctgctgccacccggcgttggcggcggatgcccaggccgcg
ctgaccttacgtgagatctgtgacctcaccaccgaagaaatcgcccgcgcgttcctggcc
acacccgccaccatcgcccagcgcatcgtgcgggccaagggcaagatccgcgaggccaag
atcccttaccaagtgccatccctggacgaattgcccgagcggctggacagtgtattgcgg
gtgatttacctggtgttcaacgaggggtattcggcgtccatgggcgctgacctgacccgt
gaagcgttgacgcgcgaagccattcgcctggggcgtttgttgctggaattgctgcccgag
cccgaagtcatggggctgctcgcactgatgctgttgcatgagtcccgacgcccggcgcgc
acctcggccaacggagagttggtgctgctggatgaacaggaccgttcgctgtgggatgcg
gccctgattgccgaaggttgcacgttggtagagcaggcgctgggcactcggcgctttggc
ccgtatggcctgcaagcggccatcgcggcagtgcatgccgaagcgtcgcgtgcagatgag
acggactggccgcagatcgtcgggctctacgatgtattgctcagggcggcgccatcaccg
gtgatcgaattgaaccgcgccgtggcgctggccatgcgggatgggccgttggcagggttg
cagcaagtggaagggattctggcgcgcggtgagttgctggattaccactgggtgcattcg
gcgcggggagagttttgtcggcaattggggcgagttgaagaggcgcgggcagcttacgaa
aaagccctgtcactgacccagcaagccccggagaaacgcttcctcgaacaacgcctggcc
gagctgcaatcgcccctccgctga
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