Pseudomonas frederiksbergensis: PFAS1_11150
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Entry
PFAS1_11150 CDS
T04786
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfk03016
]
PFAS1_11150
Transfer RNA biogenesis [BR:
pfk03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
PFAS1_11150
Prokaryotic type
Methyltransferases
PFAS1_11150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
RsgA_GTPase
Ras
ABC_tran
AAA_28
Gtr1_RagA
Motif
Other DBs
NCBI-ProteinID:
APV39873
UniProt:
A0A1P8EUK5
LinkDB
All DBs
Position
2421225..2422595
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AA seq
456 aa
AA seq
DB search
MSVPRETIAAVATAQGRGGVGIVRISGPLASVAAKAFSGRELKPRFGHYGPFLSENDEVL
DQGIALYFPGPNSFTGEDVLELQGHGGPIVLDMLLKRCLELGCRLARPGEFSERAFLNDK
LDLAQAEAIADLIEASSAQAARNALRSLQGAFSERVHNLTEQLIGLRIYVEAAIDFPEEE
IDFLADGHVLSMLDKVRDELSTVLREAGQGALLRDGMTVVIAGRPNAGKSSLLNALAGRE
AAIVTEIAGTTRDILREHIHIDGMPLHVVDTAGLRDTDDQVEKIGVERALKAIGEADRVL
LVVDATAPEALDPFALWPEFLEIRPDPAKVTLIRNKADLTGEAIALEVSEDGHVTISLSA
RSAGEGLELLRDHLKACMGYEQTSESSFSARRRHLEALRHASASLEHGRAQLTLAGAGEL
LAEDLRQAQHALGEITGAFSSDDLLGRIFSSFCIGK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttcctcgtgaaaccatcgcagccgtcgccaccgctcaaggtcgcggcggtgtg
ggcatcgtccgtatttccgggccactggcaagtgttgcggccaaggccttcagcggtcgt
gaactcaagccaagatttggccactacggcccgttcctcagtgaaaacgatgaggtgctg
gatcaaggcatcgccctgtattttccggggccgaactcgttcactggcgaagatgtgctt
gaactgcaggggcacggagggccgatcgttctggatatgctgctcaagcgttgcctggaa
ctgggctgtcgtctggcccggccgggtgaattcagcgagcgcgcgttcctcaatgacaag
ctcgatctggctcaggccgaggccatcgccgacttgatcgaggcgagttctgcacaagct
gcacgaaatgccctgcgttccttgcaaggcgcattttccgagcgtgtgcataacctcacc
gagcaactgattggcctgcgcatctatgtcgaagcggcgatcgacttcccggaagaagaa
atcgatttcctcgccgatggccacgtactgagcatgctcgacaaagtgcgcgacgaatta
tccacagtgctgcgtgaagccgggcagggtgccttgctgcgagacgggatgaccgtggtg
atcgccgggcggccaaatgccggtaaatccagcctgttgaatgcactggccggtcgtgaa
gccgctatcgtgaccgagattgccggcactacccgggacattctccgtgaacatatccac
atcgatggcatgccgctgcacgtggtcgacaccgcaggtcttcgagacaccgatgaccag
gtggaaaaaatcggcgtcgaacgggcgctgaaagcgattggtgaggctgatcgagtcctt
ttggtagtcgatgccaccgctcctgaggctcttgatccgttcgcgttatggcctgaattt
ctggaaatccgtcccgacccggcgaaagttacgctaatccgtaacaaggcagacctcacg
ggcgaagccattgccctggaagtcagcgaggatggccatgtcaccatcagcctgagtgcc
aggtctgcaggtgaagggttggagttgctgcgggaccacctcaaggcctgcatgggctac
gaacagacctcggaaagcagcttcagtgctcgcaggcggcaccttgaagcgttgcgtcac
gccagtgcttcccttgagcacggccgtgcgcagctgaccctggcgggtgccggcgaactg
ttggccgaggatttgcgccaggcccaacacgctttgggtgaaatcaccggtgcattcagc
tccgatgatctgctggggcggatcttttccagcttctgtatcggtaaataa
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