Pseudomonas frederiksbergensis: PFAS1_14920
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Entry
PFAS1_14920 CDS
T04786
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00550
Peptidoglycan biosynthesis
pfk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PFAS1_14920
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pfk01002
]
PFAS1_14920
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfk01011
]
PFAS1_14920
Enzymes [BR:
pfk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PFAS1_14920
Peptidases and inhibitors [BR:
pfk01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
PFAS1_14920
Peptidoglycan biosynthesis and degradation proteins [BR:
pfk01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
PFAS1_14920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
APV40582
UniProt:
A0A1P8EWV7
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All DBs
Position
3228182..3229339
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AA seq
385 aa
AA seq
DB search
MNITTFAKRLCLLVPLLLSPAAFAVEMMPSPPQLAAKAYVLMDASSGNVLVENNGDQRLP
PASLTKLMTAYIATLEIRRGQIGENDPVTVSENAWRTGGSRMFIKVGSQVTVSDLLHGII
IQSGNDASVALAEHIAGSEDAFADLMNKNGADLGLTNTHFMNPTGLPNPEHYSSAHDMAV
LARAIIHEDPAHYAIYSQKEFFWNGIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSA
VRDGMRLIAVVFGTNSDVVRASETQKLLTYGFRFFETQTFYQKGAELAQAPVWKGTTNQV
KAGLAQDLTMTLPKGQLKKLAASMTMNPQLIAPIAKGDVIGKVEVKLDDKVVHSADLIAL
DAVDEGGIFRRMWDSIRLFFYGLFN
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcaccacctttgccaaacgcctttgcctgctagtcccgctgctcctctcgcct
gccgctttcgcggtcgagatgatgccgtcgccgccgcaactggccgccaaagcctatgta
ctcatggacgccagcagcggcaacgtgctggtagagaacaacggtgaccagcgcctgccg
ccggccagcctgaccaagctgatgaccgcttacatcgcgaccctggaaatccgtcgcggc
cagatcggcgagaatgacccagtgaccgtcagcgaaaacgcttggcgcaccggtggttcg
cggatgttcatcaaggtcggctcgcaagtcactgtcagcgacctgctgcacggcatcatc
attcagtcgggcaacgacgccagcgttgcgctcgccgagcacatcgccggcagcgaagac
gctttcgccgacctgatgaacaaaaacggcgccgacctgggcctgaccaacacccacttc
atgaacccgaccggtctgccaaaccctgaacactactcgtcggctcatgacatggcggtg
ttggctcgcgcgatcattcacgaagacccggctcattacgcgatctactcgcaaaaagag
ttcttctggaacggcatcaagcaacctaaccgcaacctgctgctgtggcgcgacaagacc
gttgacggtctgaaaaccggccacaccgacgaagccggttactgcatggtgtcttcggca
gtacgtgatggcatgcgcctgatcgccgtggtgttcggcactaacagcgatgtagtccgc
gcctctgaaacccagaagctgctgacttacggtttccgcttcttcgaaacccagacgttc
tatcagaaaggcgccgagctggctcaggctcctgtctggaaaggcaccaccaatcaagtc
aaggccggcctggctcaagacctgaccatgaccctgccaaaaggccagctgaaaaagctc
gccgcgagcatgaccatgaacccgcaactgattgcgccaatcgccaagggcgacgtaatc
ggtaaagtcgaagtgaagctggacgacaaagtggtgcatagcgctgacctgatcgctctg
gacgcagtcgacgagggtggtatcttccgccgcatgtgggatagcatccgtctattcttc
tacggcttgttcaactga
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