Pseudomonas frederiksbergensis: PFAS1_27080
Help
Entry
PFAS1_27080 CDS
T04786
Name
(GenBank) microcin ABC transporter ATP-binding protein
KO
K13896
microcin C transport system ATP-binding protein
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PFAS1_27080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfk02000
]
PFAS1_27080
Transporters [BR:
pfk02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
PFAS1_27080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
oligo_HPY
AAA_16
AAA_29
AAA_22
ATP-synt_ab
NACHT
DUF87
SbcC_Walker_B
nSTAND3
AIG1
Mg_chelatase
ATPase
AAA_7
FtsK_SpoIIIE
AAA_23
Motif
Other DBs
NCBI-ProteinID:
APV42795
UniProt:
A0A1P8F2U4
LinkDB
All DBs
Position
5811024..5812634
Genome browser
AA seq
536 aa
AA seq
DB search
MNQDNLIEVRDLAVEFVVGERVQRVVEGVSFDIKRGETLALVGESGSGKSVTAHSILRLL
PYPLARHPSGTITYADQNLLDLKEKTIRHIRGNRIAMIFQEPMTSLNPLHSIEKQINEVL
GIHKGLVGKVATKRTLELLEMVGIPEPEKRLKALPHELSGGQRQRVMIAMALANEPELLI
ADEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQRGCIVEQA
SCEELFRAPQHPYTRELLAAEPSGKPATNVIGPPLLQVEDLKVWFPIKKGFLKKTVDHIK
AVDGINFSLPQGQTLGIVGESGSGKSTLGLAILRLIGSQGAIRFEGKQLDCLTQQQVRPL
RRQMQVVFQDPFGSLSPRMCVSQIVGEGLRIHKMGTEAEQELAIIAALKEVGLDPETRHR
YPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQTKYNLTYLF
ISHDLAVVKALSHQLMVVKQGQVVEQGDAQSIFASPKHPYTQQLLEAAFLAPATAQ
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggacaatctgatcgaagtgcgcgacctggccgtcgaattcgtcgttggcgag
cgcgttcaacgggtggtcgaaggcgtcagcttcgatatcaagcgtggcgaaaccctggcg
ctggtaggtgaaagtggctccggcaaatcagtgaccgcccattccatcctgcggctgctg
ccctacccgctggctcggcatccgtccgggaccatcacctacgccgaccagaacctgctg
gacctgaaagagaaaaccatccgtcacatccgcggcaaccggattgcgatgatctttcag
gagccgatgacttcgctcaatccgctgcactcgatcgaaaagcagatcaacgaagtgttg
ggcatccacaaaggcctggtcggcaaagtggcgaccaagcgcacgctggagctgctggaa
atggtcggcatcccggagcccgagaagcgtctcaaggccctgcctcacgaactgtccggc
ggccagcggcagcgggtgatgatcgccatggctttagccaacgagccggaactgctgatc
gccgacgagccgaccaccgcgctggacgtcaccgttcagctgaaaatcctcgaattgctc
aaggaattacaggcccggttgggcatggcgctgctactgatcagtcacgatttgaacctt
gtacgaagaattgctcatcgcgtatgtgtcatgcagcgcggttgcatcgtcgaacaggca
tcgtgcgaagagttgttccgcgcaccacagcatccgtacactcgggaactgctggcagcg
gagcccagcggcaagccggcaactaacgttatcggcccgccgttgctgcaagtcgaggac
ctgaaagtctggttcccgatcaagaaaggctttctgaaaaagaccgtcgaccacatcaaa
gcggtggacggcatcaatttcagcctgcctcagggccagaccctggggattgtgggagaa
agcggctctggcaagtcgacactgggtttggcgattttgcggctgatcggcagccaaggc
gcgatccgttttgaaggcaagcagctagactgcctgacgcagcaacaggttcgaccgctg
cgtcggcagatgcaggtggtgtttcaggacccgttcggcagcctgagcccacggatgtgc
gtgagccagatcgttggcgaaggcctgcggatccacaagatgggcaccgaggcggaacag
gaactggcgattattgcggcactcaaggaggtaggcctggatccggaaacccggcaccgc
tacccccacgaattttccggcgggcaacggcagagaatcgccattgcccgggcattagtg
ctaaaaccggcgttgattctgctggacgagccgacatcggccctcgaccggacagtgcaa
cgccaagtggtggagcttttgcgttcactgcaaaccaagtacaacctgacgtatctgttt
atcagccatgacctggctgtcgtcaaagcgctgagccaccagctgatggtggtcaagcaa
ggccaagtggtcgaacagggagacgcgcaaagtatttttgcgtcccccaaacatccgtat
acacagcagttgctggaagccgctttcctggccccagccactgcgcaataa
DBGET
integrated database retrieval system
