Pseudomonas fluorescens UK4: HZ99_18765
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Entry
HZ99_18765 CDS
T03319
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pfn
Pseudomonas fluorescens UK4
Pathway
pfn00250
Alanine, aspartate and glutamate metabolism
pfn00310
Lysine degradation
pfn00350
Tyrosine metabolism
pfn00650
Butanoate metabolism
pfn00760
Nicotinate and nicotinamide metabolism
pfn01100
Metabolic pathways
pfn01120
Microbial metabolism in diverse environments
Module
pfn_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
HZ99_18765 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HZ99_18765 (gabD)
00310 Lysine degradation
HZ99_18765 (gabD)
00350 Tyrosine metabolism
HZ99_18765 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
HZ99_18765 (gabD)
Enzymes [BR:
pfn01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
HZ99_18765 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
HZ99_18765 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
HZ99_18765 (gabD)
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GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AIG04122
UniProt:
A0A379I5F4
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All DBs
Position
4113348..4114790
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AA seq
480 aa
AA seq
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MQLKDTQLFRQQAFIDGAWVDADNGQTIKVNNPATGEILGTVPKMGAAETRRAIEAADKA
LPAWRALTAKDRANKLRRWFELIIENQDDLARLMTLEQGKPLAEAKGEIVYAASFIEWFA
EEAKRVYGDVIPGHQPDKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSAFALAELAQRAGIPNGVFSVVSGSAGDIGSELTSNPTVRKLSFTGSTEIGRQ
LMAECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRLYIQDS
VYDVFAEKLKAAVARLKIGNGLEEGTTTGPLIDEKAVAKVQEHIADALGKGATLLAGGKV
MDGNFFEPTILTNVPKNAAVAKEETFGPLAPLFRFKDEAEVIAMSNDTEFGLASYFYARD
LGRVFRVAEALEYGMVGVNTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCLGV
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttaaagacacccagttgttccgccagcaagcctttattgatggcgcttgggtc
gatgcggacaacggccaaacgatcaaggtcaacaatcccgcgactggcgagatcctgggc
accgtgccgaagatgggcgccgccgaaacccgtcgtgccatcgaagccgccgacaaggcc
ttgccggcctggcgcgcactgaccgccaaggaccgtgcgaacaaactgcgtcgctggttc
gagctgatcatcgagaaccaggatgacctggcacgcctgatgaccctggagcagggcaag
ccactggccgaagccaagggcgaaatcgtctacgccgcttcgttcatcgagtggttcgcc
gaagaggccaagcgtgtctacggtgacgtgatccctggccaccagccggacaagcgcctg
atcgtgatcaagcagccgatcggcgtcaccgccgccatcacgccgtggaacttcccggcc
gcgatgatcacccgtaaagccggcccggccctggccgccggttgcaccatggtcctcaag
ccggcgtcgcaaaccccgttctcggcgtttgccctggctgaactggcccagcgtgccggt
atcccgaacggggtgttcagcgtggtttccggcagtgccggcgatatcggtagcgagctg
accagcaacccgaccgtgcgtaaattgtccttcaccggctcgaccgaaatcggtcgccag
ttgatggccgaatgcgccaaggacatcaagaaagtttccctggagctgggcggcaacgcg
ccattcatcgtgttcgacgacgccgacctggataaggccgtcgaaggcgcgatcatctcc
aagtaccgcaacaacggccagacctgcgtctgcgccaaccgcctgtacatccaggattcg
gtgtacgacgtgttcgctgaaaaactgaaggcggccgtggccaggctgaagatcggcaac
ggtctggaagaaggcaccaccacaggtcccctgatcgatgaaaaggccgtagccaaggtc
caggaacacattgccgacgccctgggcaaaggcgcgaccctgctcgccggcggcaaggtc
atggacggtaacttctttgaaccgaccatcctcaccaacgtgccgaaaaacgccgccgtg
gccaaggaagaaaccttcggcccgctggcgccattgttccgtttcaaggacgaagccgaa
gtgatcgcgatgtccaacgacaccgagttcggcctggcgtcctacttctatgctcgcgac
ctggggcgtgtgttccgtgtggccgaggccctggagtacggcatggtcggcgtcaacacc
gggctgatttccaacgaagtggcaccgttcggtggtatcaaggcgtcgggcctggggcgt
gaaggctccaagtacggaatcgaggattacctggaaatcaaatacctctgcctgggtgtc
taa
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