Pseudomonas fluorescens UK4: HZ99_21095
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Entry
HZ99_21095 CDS
T03319
Name
(GenBank) Fis family transcriptional regulator
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
pfn
Pseudomonas fluorescens UK4
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfn03000
]
HZ99_21095
03036 Chromosome and associated proteins [BR:
pfn03036
]
HZ99_21095
03400 DNA repair and recombination proteins [BR:
pfn03400
]
HZ99_21095
Transcription factors [BR:
pfn03000
]
Prokaryotic type
Helix-turn-helix
Other families
HZ99_21095
Chromosome and associated proteins [BR:
pfn03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
HZ99_21095
DNA repair and recombination proteins [BR:
pfn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
HZ99_21095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
DUF6507
Xre-like-HTH
UPF0175
Motif
Other DBs
NCBI-ProteinID:
AIG04563
UniProt:
A0A075PMD8
LinkDB
All DBs
Position
complement(4633482..4633802)
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AA seq
106 aa
AA seq
DB search
MTMMTETLVSGTTPVSDNVNLKQHLNTPSEEGQTLRGSVEKALHNYFAHLEGAAVTDVYN
LVLSEVEAPLLESVMNYVKGNQTKASELLGLNRGTLRKKLKQYDLL
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgatgaccgagactttagtgagtggaacaacacccgtgagcgacaacgtcaat
ttgaaacagcacctcaacacgccgagcgaagaaggccagacccttcgcgggagcgtcgag
aaagcgctgcacaattatttcgcccaccttgagggcgcggccgtcacggatgtgtacaac
ctggtgctctccgaagtcgaggcgcccttgctcgaaagcgtgatgaactacgtcaagggc
aaccagaccaaagccagtgagctgctgggcctgaaccgtgggaccctgcgcaagaagctc
aaacagtacgatttgctgtaa
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