Pseudozyma flocculosa: PFL1_00361
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Entry
PFL1_00361 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfp03400
]
PFL1_00361
DNA repair and recombination proteins [BR:
pfp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
PFL1_00361
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GIY-YIG
SLX1_C
DNA_pol_phi
CDC45
YL1
Motif
Other DBs
NCBI-GeneID:
19314494
NCBI-ProteinID:
XP_007876048
LinkDB
All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
MPSSVAAHTIPPFYACYFLRSLSVPGSTYIGSTPSPPRRKRQHNGELTQGASRTIRSRPW
EMECIVYGFSSKIAALQFEWAWAKPHLSRHLRTSAHALGAAEPIESTAPSTPLFPPVGIV
KTGRRKTKRPKPPASPNARLLVLRALLRSEPFSGWGLRVAFFTEWSWAAFQLLERARDGI
IAADGQAGPSRLSGSRAGRLLHPAYPAVVCDFTGVDGKRKPVSAMSAEERKVIGVKGIEE
AGSKAGKKAIKKAKEGRASGFIEELPDGANVKGIGLTLQALEDAPLPAPSVPADGRILIK
KKRRSKAQVQEDNLDAQEEPQSSRAWPSMRFNDADLTELQWARFEDVLSAHGFTADELLD
IYKAASSSTLKGRPAKGKVSCGICQGAVDVTDTLSYSLCPQPHARLQPRSAIELRTSGSS
DQGVGDHHCKSFFHLKCLAEHFLRSEAGGIDQDAFILPAHGCCPSPQHEAPSSKAEPVYW
ADVVRGVYRRRDRLELLLAVREKRAAALPDPAAMFADDDDDDDDDAEEEDDDDEEEDEGD
GDEVGGDSQCDGSDRNAIKAPPPSVKNKRTTKPRASNKATPSAKKSSPSAKPTNARRGRQ
PKPATAARGGTRETRVTLSSSPEVSEGDDDGQTSDMPPMSPVLDEDTRDAAASILATKAA
ASTLSFTVEEAPSPLPRRSNRKRKSTGEGVIDLT
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcttctgtcgcggcacacaccatcccgcccttctacgcctgctactttctgcgc
tccctctcggtccccggctcgacctacatcggctcgaccccctcgccaccacggcgcaag
cgacagcacaatggagagctcactcagggtgcatcccgcacgatccgatcccgcccctgg
gagatggaatgcatcgtatacggcttcagctccaagattgccgccctccagtttgaatgg
gcgtgggccaagccccacctctctcgccacctccgcacctcggcccacgcacttggcgcc
gcagagcctatcgaatccacagcgccttccacgccgctcttcccaccggtcggcatcgta
aagactggacggcgcaagaccaaacggccaaagccacccgcttcacccaacgctcgcctg
ctcgtcctccgcgctctcttgcggtctgagcccttcagcggctggggacttcgcgtggct
ttcttcaccgaatggagctgggccgccttccagctgctcgaaagggcaagggatggcatc
atagctgccgacggtcaggccgggccgtcacggctcagcggcagccgagcaggtcgtcta
ctccatcccgcctatccagcggtggtgtgcgacttcacaggggtcgatgggaagcggaaa
cccgtgtccgctatgtcggctgaagagaggaaagtgataggcgtcaagggcatcgaagaa
gccggctccaaggctggcaagaaagcaatcaagaaggcgaaagagggtcgagcttcgggg
ttcatcgaggagctaccagacggcgccaacgtcaaagggatcggcttgacactacaggca
ctcgaggatgcacccctaccagcgccatccgtacctgctgacgggcgcatcctgatcaag
aagaagcggcggtcaaaggcgcaagtgcaggaggacaacctggatgcgcaggaagagcct
cagtcgtctcgggcgtggccctcgatgcgattcaatgatgcggatctcaccgagctgcag
tgggcgcgtttcgaggatgtgctcagtgcgcatggtttcaccgccgatgagctcctcgac
atctacaaggctgcctccagctccactttgaagggccgcccagccaagggcaaagtcagc
tgcggcatctgtcagggtgctgtggatgtcactgataccctctcatacagtctgtgccct
cagccacatgctcggcttcagcctcgttccgccatcgagcttcggacatccggcagcagc
gaccagggcgtcggcgaccaccattgcaagtcgttcttccatctgaagtgcctggccgag
cacttccttcgaagcgaggcgggtggaattgatcaagacgccttcatccttcccgcccac
ggatgttgtccaagcccacaacacgaggcccccagctcgaaagcagagccggtctactgg
gccgatgtggtgcgcggagtataccggcgccgggacaggctcgagttgctgctcgcggtc
cgcgagaagcgagccgccgcccttccagatcctgcggccatgtttgcggacgacgacgac
gatgacgatgacgatgcagaagaagaagacgatgacgatgaggaagaagacgaaggcgat
ggtgacgaggtcggcggcgactcgcaatgcgacggttcggacaggaatgcgataaaagcg
cctcccccgtcggtcaagaacaagcgaaccaccaagccaagggcatccaacaaggctaca
ccctccgcaaagaagagcagcccgtctgcaaagccgacaaacgcaagaagaggccggcag
ccgaaaccagcaactgccgctcgaggtgggacgagggagacgcgcgtcaccctctcgagc
agcccggaagtctccgaaggagacgatgatggccagacttcagacatgccgcccatgtcg
ccggtgctggacgaagatacccgagacgccgctgcgagcatcctcgccactaaggcggct
gccagtactcttagcttcacggtcgaggaggcgcccagccctctgccgcgaagatccaac
aggaagcgcaagtcgactggcgagggtgtcattgatctcacgtag
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