Pseudozyma flocculosa: PFL1_04489
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Entry
PFL1_04489 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K19720
collagen type III alpha
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pfp00536
]
PFL1_04489
Glycosaminoglycan binding proteins [BR:
pfp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
PFL1_04489
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GET2
Motif
Other DBs
NCBI-GeneID:
19318592
NCBI-ProteinID:
XP_007880204
UniProt:
A0A061H5I1
LinkDB
All DBs
Position
Unknown
AA seq
1073 aa
AA seq
DB search
MATTGPPPGLGHRAPAASSLPPNPFSNSAQASPVEAAAEHAAQPPVAAATSNRLRPSNCP
RTYSRATLLAYSTSPLVSQPQGMAPLRDWYGEWEPYQHKSTPYQYRDSPRRNLDESVASP
SPAHADADQGEGGAAAHSGGLIGGALGGFGPKREGGARFGRRQEDRDKGEGGLRLGALPS
RNFAPSGKNPFGQISASGTFRPAGSTPGLGGREREPRGPRDGGPDSPSEFRRFPLSERST
SFGKERNRDRDAPPHLAGSGDERPRSGMRDRAGEGERTGNGRDFGGLRDGRRRPGGLEGD
DDLDEAGEAIESPRTRRTGGADLASDWRKPSDKDRLGLSRSSGYANGAGERLRGERFPRE
RGGGGKGVPSWMGDGDGADSPAWMDEDTSSPLATPSKGAGLGSFGRRKEADPELSRSKDD
LGGAVDSIQAFKAQMKERERLERERALGTGATAARGASGIRLDDKGSGAASSPADAPAGG
RSNGDAGAASSSSVASGPPPGLYDTMSNSHGGGPAAGATDAPPGLPGRSSRFARFFDGRP
GMRDPQAAALAAQQKLLESRGNLISATPSLDRPSSAAAHDKPAAAAATATATTGETKPPQ
PSAANDQKPSTGINIADLFKQASSGEGSGDKRAEGQSKASEADVQSMQKLMAMLQAGGGG
GGGSGSGSQSGGPRSSDGRDASTPVHAQGPRPDSVNRMRELLGGGGVGNGGGNGEGTPGS
HGGQRPAASFSDDDRSQMASPGVTSPQAPHGYGFPPGFGVALQQQPHQPHEQGTDPRGHH
SRVISTSSKSNQQRSQSPAIQAVASPYNDHAAVHRLQQQQQQQQGQQGQGQGQPMPGYPG
GVPAGRPSDPSSLGPYGFPSPGPGNVSGGRPPFGMDPRMMSRPPMGAPGLGSTGPGQLPP
HIAAALGFGRGPVPPPGLASPPPPPPGGMGGPRGAPPMSGQYPNFPPPFGGRPPPPGMPP
QLYQQLMSLPPHLQHQLLSGQGLPGPGGPGPMPGQAGGPRSPYDMPLQHQGPMPTSPQPQ
PQPQPHGQQPQHQHPASMGSPPPPGIPPVGSQAMNGANLMALLSGAHRGPGGN
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgactggaccaccgccagggctcggccatcgtgcgcccgcagcctcatccctg
ccgccgaaccccttctccaactccgcccaagcaagccccgtcgaggcagccgccgaacat
gccgcccagccaccggtcgccgcagcaacatccaacaggctcaggccgagcaactgccct
cgcacctacagccgagccacgctgctggcctacagcaccagccccctcgtctcgcagcca
cagggaatggctcccctgcgagactggtacggcgagtgggagccctaccagcacaagtcg
acgccctaccagtaccgtgactcgcctcggcgcaacctcgacgagtcggtcgcctcgcca
tcaccggcccacgccgacgccgaccagggcgaaggcggcgccgcggcccacagcggcggc
ctgattggcggtgctctgggcggcttcgggcccaagagagaaggcggcgcacgcttcgga
aggcgacaggaggaccgggacaagggcgagggaggtctccgccttggagcgctgccctct
cgaaactttgccccctcgggcaagaacccctttggccaaatctcggcgagcggcacattc
cgtcccgcaggcagcacgccagggctcggcgggcgcgagcgggagccgcgcgggccccgg
gacggcgggcccgacagtccgtccgagtttcgaaggtttccgctctcggagcgctccacc
tcgttcggcaaggaacgcaaccgcgaccgagatgcgccgccccacctggccgggtctggc
gacgagcgaccccggagcgggatgcgggaccgcgctggcgagggcgagaggaccggcaac
gggcgcgactttggaggcctccgcgacggcaggaggaggccgggcggcctcgagggagac
gacgacctcgacgaggccggagaggcgatcgagtctccgaggaccaggaggacgggcggc
gccgacctcgcctcggactggaggaaacccagcgacaaggaccgcctcggcctctcgcga
tcgtcgggctatgccaatggcgcgggcgaacggctccggggcgaacgcttccctcgagag
cgaggcggcggcggcaagggcgtgccgtcctggatgggcgacggcgacggcgccgactcg
ccggcctggatggacgaggacacgagctcgccgctggcgacgccgtccaagggcgcaggc
ctcggctcctttggccggcgcaaggaggccgacccggagctctcgaggtccaaggacgac
ctcggcggcgcagtcgacagcatccaggcgttcaaggcgcagatgaaggagcgcgagcgg
ctggagagggaacgggccctcggcaccggcgccaccgctgccaggggcgcctcgggcatc
aggctcgacgacaagggctctggcgcggcgtcgagcccggccgatgccccggcgggcggc
cggtccaacggagacgctggcgccgccagcagctcgtctgtcgcctcgggcccgcctccg
ggcctgtacgacaccatgtccaacagccatggaggcggacctgccgctggcgcgaccgat
gcgccgcccggtcttcccggccgctcgagccggttcgcgcgcttctttgacggccgtccg
gggatgcgcgacccgcaggctgcggcgctggcggctcagcaaaagctgctcgaatcgcgc
ggcaacctgatctcggccacgcccagcctcgaccggcccagctcggccgccgcccacgac
aagccggccgcggcggcggcgacggcgacggcgacaacgggcgagaccaaacctccgcag
cccagcgctgcaaacgaccagaagccttccacgggcatcaacatcgccgacctcttcaag
caggcctcttcgggcgagggcagcggcgacaagcgcgccgagggccagtccaaggccagc
gaggccgacgtgcagagcatgcagaagctcatggccatgcttcaggccggcggcggaggc
gggggcggcagcggcagcggctcgcagtcgggtggtccgcgctcgagcgacggtcgcgac
gcgtcgactcccgttcatgcccagggaccccgtccggactcggtcaataggatgcgggag
ctcctcggcggcggcggtgtcggcaacggcggtggcaacggagaaggcactcctggcagc
catggcggtcagcggccggcggcgtcgttttccgacgacgaccgcagccagatggcctcg
ccgggcgtcacgagcccgcaggcgccccacggctacggcttcccacccggcttcggcgtc
gccttgcagcagcagcctcaccagccacacgagcagggcaccgatcctcgaggccaccat
tcgcgcgtcatcagcacgtcgagcaagtcgaaccagcagcgctcccagtcaccggcgatt
caggcagtcgcctcgccctacaacgaccacgccgccgtccaccgactgcagcagcagcag
cagcagcagcaaggccagcagggccagggccaggggcagccgatgcctggctacccgggc
ggcgttcccgcgggacgtcccagcgatccctcgagcctcggaccgtacggcttcccgagc
cctgggcctggcaacgtgtcgggcggcaggccaccgtttggcatggacccgaggatgatg
tcgcgcccgccgatgggcgcgcccggtctcggatcgacggggccgggccagctgccgccg
cacattgccgccgcgctgggcttcggccgaggacctgtgccccctcccgggctggccagc
cctcctcctccaccgcccggcggcatgggcggaccgcgaggagccccgcccatgtcgggg
cagtaccccaacttcccacctccgtttggcggccgacctccgcctccgggaatgccgccg
cagctgtaccagcagctgatgagcctgcctccgcacctgcagcatcagctcctctctggc
cagggcctgcccgggcccggaggacctggacccatgcccggacaggcaggcgggccccgg
tcgccgtacgacatgcctctgcagcaccaggggccgatgccgacgtcgccccagccccag
ccccagccccagccgcacggccagcagccgcagcaccagcacccggcgagcatgggcagc
ccgccgccccccggcatcccgcccgtgggctcgcaggccatgaacggcgcgaacctcatg
gctcttctcagcggcgcccaccgcgggcccgggggcaactga
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