Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1: PFREUD_11720
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Entry
PFREUD_11720 CDS
T01252
Symbol
ruvC
Name
(GenBank) Crossover junction endodeoxyribonuclease (Holliday junction nuclease) (Holliday junction resolvase)
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
pfr
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
Pathway
pfr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PFREUD_11720 (ruvC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfr03400
]
PFREUD_11720 (ruvC)
Enzymes [BR:
pfr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
PFREUD_11720 (ruvC)
DNA repair and recombination proteins [BR:
pfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PFREUD_11720 (ruvC)
RecFOR pathway proteins
PFREUD_11720 (ruvC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
CBL56694
UniProt:
D7GDT3
LinkDB
All DBs
Position
complement(1318504..1319115)
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AA seq
203 aa
AA seq
DB search
MGVDPGLTRCGVGIVDGTPGARPQFVAVGVIRTDPHTEHAYRLLAIEEGLGEWFDHYQPQ
AISIERVFAQHNLSTVTGIGQVAGIAMMLGARHGIDVALHTPSEVKSAVTGSGRADKAQV
GVMVAQVLHLAKAPTPADAADALALAVTHLWRGSAQNRYATAALQGRSSAAVARARRSAA
IARAARSRTERQASSTRGTRGSS
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttgacccgggcctgacgcgttgcggtgtcggaattgtcgacggaacccccggc
gcgcgtccccagttcgtggccgtgggcgtcatccgcaccgatccgcacaccgagcacgcc
tatcggctgctggccattgaagagggcctgggggagtggttcgaccactaccagccgcag
gcgatctccatcgaacgtgtcttcgcccaacacaatctcagcaccgtgacggggatcggg
caggtcgccggcatcgccatgatgctcggcgcgcgccatggcattgacgtggccctccac
acgcccagcgaggtcaagagcgccgtgaccggttccggtcgggccgacaaagcccaggtg
ggcgtgatggtggcccaggtgctccacctcgccaaggcgcccacgcccgccgacgcagcc
gatgccctggccctggcggtcacccacctgtggcggggcagcgcccagaaccgctatgcg
accgctgccctgcagggtcgttcgtccgccgccgtggcgcgcgcccgccgatcggcggcc
attgcccgcgccgcgcggtcacgcaccgagcggcaggcatccagtactcgtggaacccgg
gggagttcgtga
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