KEGG   Propionibacterium freudenreichii subsp. freudenreichii DSM 20271: RM25_0908
Entry
RM25_0908         CDS       T03860                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
pfre  Propionibacterium freudenreichii subsp. freudenreichii DSM 20271
Brite
KEGG Orthology (KO) [BR:pfre00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    RM25_0908
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfre03021]
    RM25_0908
Transcription machinery [BR:pfre03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     RM25_0908
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 TFIIE-A_C
Other DBs
NCBI-ProteinID: AJQ90630
LinkDB
Position
1057129..1058658
AA seq 509 aa
MTARTKEKTSTTAESATREDSGKITKPRAKKTLAAASAVKTGTVKADAKSAKATSAAKEP
ATKSAGTKTRSSAARKAAPTKSKAAAKGESTAKKAAPKKAAAKTRTHKATKATTSKAALT
EAMAGKKSGKAQAEGIEVTFERDGDDIVVRAGGKKRTLDDVDDSKFEKDKKEAEKDEAKI
NADSQGFSLSDNDEDDEPEQQVMVAGATADPVKDYLKQIGKVALLNAAQEVDLAKRIEAG
LFAGEQLTKNGDKIARADRGDYEWITEDGHRAKNHLLEANLRLVVSLAKRYTGRGMLFLD
LIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIKQAITRAMADQARTIRIPVHMVEVINKL
ARVQRQMLQDLGREPTPEELAKELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLI
EDSEAVVPADAVNFTLLQEQLHDVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVT
RERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq 1530 nt   +upstreamnt  +downstreamnt
gtgacggctcgcacgaaggaaaagacctccaccactgccgaatcggcaactcgggaagac
agtgggaagatcaccaaaccgagggcaaagaagacccttgcggccgccagcgcggtgaag
accggcacggtcaaggcagacgcgaagtcggccaaggccacctccgcggccaaggaaccc
gccacgaagtccgcgggaacgaagaccaggtcgagcgcggccaggaaggccgccccgacc
aagtcgaaggcggctgccaagggcgagtcgacggccaagaaggccgcgccgaagaaggcc
gctgcgaagacccgcacccacaaggccacgaaggccaccaccagcaaggccgcactgacc
gaggccatggccggcaagaagtcgggcaaggcccaggccgagggcatcgaggtcaccttc
gaacgcgatggtgacgacatcgtggtgcgcgccgggggcaagaagcgcaccctggacgac
gtcgatgactccaagttcgagaaggacaagaaggaagccgagaaggacgaggcgaagatc
aacgccgactcccagggcttcagtctgtcggacaatgatgaggacgacgagcccgagcag
caggtcatggtcgccggcgccacggccgatccggtgaaggactacctcaagcagatcggc
aaggtggcattgctcaatgccgcccaggaggtcgacctcgccaagcgcatcgaagcgggg
ttgttcgctggcgagcagctcaccaagaatggcgacaagatcgcgcgggcggaccgcggt
gactatgagtggatcaccgaggacggccatcgggccaagaaccacctgctcgaagccaac
ctccgcctggtggtgagcctggccaagcgctacaccggccgcggcatgttgttcctcgac
ctcatccaggaggggaacctcggcctgattcgcgccgtcgagaagttcgactacacgaag
ggctacaagttctcgacctatgcgacgtggtggatcaagcaggccatcacgcgcgccatg
gccgatcaggcccgcaccatccgcatcccggtgcacatggtggaggtcatcaacaagctc
gcccgcgtgcagcgccagatgctgcaggaccttggccgcgaacccacgccggaggagctg
gccaaggaactggacatgactcccgagaaggtcgtggaggtgcagaagtacgggcgcgag
ccgatcagcctgcacacccccctcggggaggatggtgactccgagttcggtgacctgatc
gaggactccgaagccgtcgttcctgccgatgcggtgaacttcacactgctccaggagcag
ctgcacgatgtgctcgacacgctcagtgagcgcgaggcgggcgtggtgtccatgcgcttc
ggcctgaccgatggccagcccaagaccctggacgagatcggcaaggtctatggggtgacc
cgtgagcgcatccgccagatcgaatcgaagacgatgagcaagctgcgccatccgagccgg
tcacaggtgctgcgcgactacctggactga

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