Propionibacterium freudenreichii subsp. freudenreichii DSM 20271: RM25_0908
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Entry
RM25_0908 CDS
T03860
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
pfre
Propionibacterium freudenreichii subsp. freudenreichii DSM 20271
Brite
KEGG Orthology (KO) [BR:
pfre00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RM25_0908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfre03021
]
RM25_0908
Transcription machinery [BR:
pfre03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RM25_0908
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
TFIIE-A_C
Motif
Other DBs
NCBI-ProteinID:
AJQ90630
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Position
1057129..1058658
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AA seq
509 aa
AA seq
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MTARTKEKTSTTAESATREDSGKITKPRAKKTLAAASAVKTGTVKADAKSAKATSAAKEP
ATKSAGTKTRSSAARKAAPTKSKAAAKGESTAKKAAPKKAAAKTRTHKATKATTSKAALT
EAMAGKKSGKAQAEGIEVTFERDGDDIVVRAGGKKRTLDDVDDSKFEKDKKEAEKDEAKI
NADSQGFSLSDNDEDDEPEQQVMVAGATADPVKDYLKQIGKVALLNAAQEVDLAKRIEAG
LFAGEQLTKNGDKIARADRGDYEWITEDGHRAKNHLLEANLRLVVSLAKRYTGRGMLFLD
LIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIKQAITRAMADQARTIRIPVHMVEVINKL
ARVQRQMLQDLGREPTPEELAKELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLI
EDSEAVVPADAVNFTLLQEQLHDVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVT
RERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
gtgacggctcgcacgaaggaaaagacctccaccactgccgaatcggcaactcgggaagac
agtgggaagatcaccaaaccgagggcaaagaagacccttgcggccgccagcgcggtgaag
accggcacggtcaaggcagacgcgaagtcggccaaggccacctccgcggccaaggaaccc
gccacgaagtccgcgggaacgaagaccaggtcgagcgcggccaggaaggccgccccgacc
aagtcgaaggcggctgccaagggcgagtcgacggccaagaaggccgcgccgaagaaggcc
gctgcgaagacccgcacccacaaggccacgaaggccaccaccagcaaggccgcactgacc
gaggccatggccggcaagaagtcgggcaaggcccaggccgagggcatcgaggtcaccttc
gaacgcgatggtgacgacatcgtggtgcgcgccgggggcaagaagcgcaccctggacgac
gtcgatgactccaagttcgagaaggacaagaaggaagccgagaaggacgaggcgaagatc
aacgccgactcccagggcttcagtctgtcggacaatgatgaggacgacgagcccgagcag
caggtcatggtcgccggcgccacggccgatccggtgaaggactacctcaagcagatcggc
aaggtggcattgctcaatgccgcccaggaggtcgacctcgccaagcgcatcgaagcgggg
ttgttcgctggcgagcagctcaccaagaatggcgacaagatcgcgcgggcggaccgcggt
gactatgagtggatcaccgaggacggccatcgggccaagaaccacctgctcgaagccaac
ctccgcctggtggtgagcctggccaagcgctacaccggccgcggcatgttgttcctcgac
ctcatccaggaggggaacctcggcctgattcgcgccgtcgagaagttcgactacacgaag
ggctacaagttctcgacctatgcgacgtggtggatcaagcaggccatcacgcgcgccatg
gccgatcaggcccgcaccatccgcatcccggtgcacatggtggaggtcatcaacaagctc
gcccgcgtgcagcgccagatgctgcaggaccttggccgcgaacccacgccggaggagctg
gccaaggaactggacatgactcccgagaaggtcgtggaggtgcagaagtacgggcgcgag
ccgatcagcctgcacacccccctcggggaggatggtgactccgagttcggtgacctgatc
gaggactccgaagccgtcgttcctgccgatgcggtgaacttcacactgctccaggagcag
ctgcacgatgtgctcgacacgctcagtgagcgcgaggcgggcgtggtgtccatgcgcttc
ggcctgaccgatggccagcccaagaccctggacgagatcggcaaggtctatggggtgacc
cgtgagcgcatccgccagatcgaatcgaagacgatgagcaagctgcgccatccgagccgg
tcacaggtgctgcgcgactacctggactga
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