Propionibacterium freudenreichii subsp. freudenreichii DSM 20271: RM25_1612
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Entry
RM25_1612 CDS
T03860
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pfre
Propionibacterium freudenreichii subsp. freudenreichii DSM 20271
Pathway
pfre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RM25_1612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfre03400
]
RM25_1612
Enzymes [BR:
pfre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
RM25_1612
DNA repair and recombination proteins [BR:
pfre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RM25_1612
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_S66
Phe_tRNA-synt_N
Motif
Other DBs
NCBI-ProteinID:
AJQ91321
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Position
1822333..1823484
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AA seq
383 aa
AA seq
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MIELRRRAGAYMHFLTLRDTSSEVSAQVTATTAVLDQAGPLTEGTTVLAKVRPRVWNKTA
RLSFECFELRIAGEGQLLAELEKLKRKLQAEGLFSPARKKPLPMIPRLIGLITGADSAAE
RDVLTNTQRRWPSARFRVRHALVQGPSSVADVTAALAELDADPQVDLIVIARGGGSLENL
LPFSDEGLVRAVAAASTPVVSAIGHEPDTPILDLVADLRASTPTDAAKRIVPDAAEERHA
VAQLVARARTAIIARVSNAQAELNQLVSRPVLSDPSAALSGHTEQLEMMRFRLDTAIDRL
LDHERTDVAHAVQRIRAMSPKATLERGYAIVADADNASVTSVTQTEPGDQLMVFLSDGRL
VVEVDDTLPGGSGPAGADDPPAR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaattgcgacgccgcgccggcgcctatatgcacttcctcaccctgcgtgacacg
agctccgaggtgtcggcccaggtcactgccacgacggcggtgctcgaccaggccgggccc
ctgaccgagggcaccaccgtgctggccaaggtgcggccccgcgtgtggaacaagaccgcc
cgcctcagcttcgaatgcttcgagctgcgcattgccggcgagggccagctgcttgccgag
ctcgagaaactcaagcgcaagctccaggccgagggcctgttcagccccgcccgcaagaag
ccgctcccgatgatcccgcggctcatcggactgatcaccggcgccgattcagccgccgaa
cgcgatgtgctcaccaacacccaacgacgctggccctcggcacgattccgcgtgcgccac
gccctggtgcagggccccagctcggtggccgatgtcacggccgcgctggccgagctcgac
gccgacccgcaggttgacctgatcgtcattgcccgcggtggtggttccctggagaacctg
ctgccgttcagcgacgaggggctcgtgcgtgcggtcgccgccgcctcgacgcccgtggtg
agcgccatcggtcacgaaccggacacgccgatcctcgacctggtggccgacctacgggcg
tcgacccccaccgacgccgccaagcgcatcgtgcccgatgccgccgaggagcgtcacgcc
gtggcccagctggtggcccgggcgcgcacggcgatcatcgcccgcgtcagcaacgcccag
gcagaactcaaccagctggtctcgcgtcccgtgctctccgatccgtccgctgccctgtcg
ggccacaccgagcagctcgagatgatgcgcttccgcctcgacaccgccatcgatcggctg
ctcgaccacgaacgcaccgatgtggcccatgccgtgcagcgcatccgggccatgtcgccc
aaggcgaccctggagcgcggctacgccatcgtggccgatgcggacaatgcctcggtcacc
tcagtgacccagaccgagccgggtgaccagctgatggtcttcctgtcggacggacgcctg
gtggtggaggttgacgacacacttccgggtggttcggggcccgcaggtgccgacgacccg
cccgcacgatga
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