Pseudomonas fluorescens SBW25: PFLU_5626
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Entry
PFLU_5626 CDS
T00899
Name
(GenBank) Putative DNA poymerase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pfs
Pseudomonas fluorescens SBW25
Pathway
pfs03030
DNA replication
pfs03430
Mismatch repair
pfs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFLU_5626
03430 Mismatch repair
PFLU_5626
03440 Homologous recombination
PFLU_5626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfs03032
]
PFLU_5626
03400 DNA repair and recombination proteins [BR:
pfs03400
]
PFLU_5626
Enzymes [BR:
pfs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PFLU_5626
DNA replication proteins [BR:
pfs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PFLU_5626
DNA repair and recombination proteins [BR:
pfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PFLU_5626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CAI2799764
UniProt:
C3K374
LinkDB
All DBs
Position
1:6166057..6166764
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AA seq
235 aa
AA seq
DB search
MSLFGWLRKKKPGLDAAQQRRLEQLPKPAALGDGSLRSQRWVVLDLETSGLNLNRDQVLS
IGAVVIEDGAVDFSQLFERTLQRAETKLSPSVLIHGLGPSAIAAGSDPVEALLDFMAFVG
DSPLLAFHAPFDQHMLCRALKDSLGYRLAHPFLDVADIAPLLCPQAHIREAGLDDWINHF
NLHVGERHHASADALATAELMLILFSRARAQHIDTPQALQERLSQWKRRQHAPSF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
gtgagtttgttcggctggctgcgtaagaaaaaaccagggctcgacgcggcgcaacaacga
cgactggagcaattgcccaagcctgcagcattgggcgacggctcattgcgcagccaacgc
tgggtcgtgctggacctggaaaccagcggcctgaacctcaaccgtgaccaagtgctgtcc
atcggcgcggtggtgatcgaggacggcgcggtggacttctcccagctgttcgaacgcaca
ctgcaacgcgccgagacaaaactcagccccagcgtattaatccacggcctcggccccagt
gcgatcgccgccggcagcgatccggttgaagccctgctggacttcatggcgttcgtcggc
gacagcccgttgctggccttccatgcgccgttcgatcaacacatgctgtgccgggcgctc
aaggacagcctgggttaccgcctggcccatccgtttctggatgtggccgacatcgccccg
ctgctatgcccgcaagcccatatccgcgaagcggggctggacgactggatcaaccacttc
aacctgcacgtgggcgaacgccatcacgccagcgccgatgccctggccacggccgagctg
atgctcatcctgttcagccgcgcgcgtgcgcaacacatcgacacgcctcaggcgttgcaa
gagcgtttgagccaatggaaacggcgccaacacgcaccctctttctaa
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